Gene CPS_4578 details

Gene Information

• Locus tag: CPS_4578
• ID: 3522112
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 4832021
• End bp: 4832713
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637287018
• Product: hypothetical protein
• Protein accession: YP_271226
• Protein GI: 71281640

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGAGC AATGGAAAAG TTACAGTGAA AAATTTCTTC AACTAACGAG TAGAGAGCAA 
TTTTTACTAC TGTCGACAGG GCTAGTAGCC ATATTTTTTA TTATCTCATC TTTTTATATT 
GATGATAAAA GTGCCCAAAC AATCTCATAT GATAAACAAA GTCGAACGAT TACATCAGGT 
AATCAATCCC TTAATTTCTC TATTAAAGAA TATCAAGCAG CATTAAAACA AGATCCTAAT 
GTCAATACGG TTAAACAAAT TGCTCAACTT GAAACAAAGC TAGCCAATAT TGATAATCAA 
CTAGTGCTTT TAACTACCGA TCTAATTAGT CCTAGCGAAA TGCGTGAAGC CTTACTTAAG 
TTGCTTGAAT TAGAGCCAGG TGTATCGTTA CTTTCCTTTG AATTAATAGG CGCTAAACCT 
TTATTAAATC TAAGCAACGA GCAATCGAGT GCTGATTCAG GAAACCATTC ACCCACAGCC 
GAACAACTTG GTTTAAATTT ATATAAACAT GGTATTAAGA TTAAATTGTC AGGTAAATAT 
TTTCAGTTAC GTAATTACTT ACAACAGCTA GAACAGTTAA CGTGGAAGTT TTTTTGGCAA 
GATTTTAAAT TCGAAGTCAA AGAATACCCG CGTGGTGAAG TCAACATAAC TATTTATAGT 
TTAGGATTGA AAAAGGAGTT TATCGGTGTT TAA 

 

Protein sequence

MKEQWKSYSE KFLQLTSREQ FLLLSTGLVA IFFIISSFYI DDKSAQTISY DKQSRTITSG 
NQSLNFSIKE YQAALKQDPN VNTVKQIAQL ETKLANIDNQ LVLLTTDLIS PSEMREALLK 
LLELEPGVSL LSFELIGAKP LLNLSNEQSS ADSGNHSPTA EQLGLNLYKH GIKIKLSGKY 
FQLRNYLQQL EQLTWKFFWQ DFKFEVKEYP RGEVNITIYS LGLKKEFIGV