Gene CPS_4558 details

Gene Information

• Locus tag: CPS_4558
• Symbol: mreD
• ID: 3519418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 4811339
• End bp: 4811818
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637286998
• Product: rod shape-determining protein MreD
• Protein accession: YP_271206
• Protein GI: 71279099
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAGCA ATAATGGTTT TATTATTTTC CTTACCCTAT TAATTGCTTT GATGGCAAGT 
ATTACCCCTA TGCCATTGAG CGTAGATGCT TTTCGCCCAG ATTGGGTGCT TATTGTATTG 
GTTTACTGGT GCTTAGCATT ACCTAATAAA ATAAATATTT TTACCGCGTG GGTAATGGGC 
TTTATCCTTG ATGTTTTACT TGGCTCTGTG CTGGGTGTTC ATGCTTGTGC GATGGCTTTA 
TCTGTTTATA TTGTTGTAGT TAATTTTCAA AAAATTAGAA ATTTCTCCGT TTGGCAACAA 
GCACTCATTA TTGGCGTACT CTCTGCGCAA TACCACCTTG TTGTTTTTTG GTTGCAACGC 
TTCTTAAGTG ATGTTGTATT CTTACCTAAT TATTTATACC CAGTGATAAC TACGATTGTA 
CTTTGGCCAT GGGTGTTTTT ATTATTACGC CGTGTCCGCC GTCATTTCCG CATTGAATAA 

 

Protein sequence

MFSNNGFIIF LTLLIALMAS ITPMPLSVDA FRPDWVLIVL VYWCLALPNK INIFTAWVMG 
FILDVLLGSV LGVHACAMAL SVYIVVVNFQ KIRNFSVWQQ ALIIGVLSAQ YHLVVFWLQR 
FLSDVVFLPN YLYPVITTIV LWPWVFLLLR RVRRHFRIE