| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4556 |
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| Symbol | cafA |
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| ID | 3522587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4809160 |
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| End bp | 4810617 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286996 |
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| Product | ribonuclease G |
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| Protein accession | YP_271204 |
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| Protein GI | 71282114 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGCTG AATTATTAAT CAACGTTACA CCTAGCGAGA CACGTGTTGC TTTGATCGAA
AATGGCTCAC TGCAAGAAGT GCATATAGAG CGACAAGCAA AACGTGGCAT TGTTGGTAAT
ATCTATTTAG GTAAAGTCAT TCGTGTTTTA CCAGGCATGC AAGCAGCCTT TGTCGATATT
AATCTTGATA AAGCAGCATT TCTACATGCT TCAGATATTA ATAGCAAACT CATCTTAAAA
GAAGAAACTG ATCAAGTACC TGACATTCGA TCTTTAGTAC ACGAAGGTCA ACACATCATG
GTACAAGTGG TTAAAGATCC GCTTGGCTCA AAAGGAGCGC GTTTAACAAC AGATATCACA
ATTGCGTCAC GTTACCTGGT ATTAATGCCT AACTCCCAAC ATGCGGGCAT ATCCTTACGT
ATTGAAAATC CTAATGAGCG AGATCGTTTA AAAGATATCG TTACCCCTTA TTGCGATGAG
CAACAAGGAT TTATAGTTCG TACTGCGGGT GAAGGTGCTG ATGAGTTAGA CCTCCAACAT
GATGCTGAAT TTTTACGTCG AGTATGGCAT AAGGTGTTAG CGCGCAAACA GCGTAAGCAA
ACTAATTTAC CTCTTTATCA AGATCTCTCT TTATCCTTTC GAGTGTTAAG GGATTTTGTC
GGTATTAATC TTGAGCGTAT TCGTATTGAC TCTAATCTGA CTTTTCAAGA ATTAACCGTT
TTTACTGAAG AATTTGTACC TGAGTTGACA CCTTTATTAG AATATTATCC AGGTGAGTTA
CCTATTTTTG ATCTGTTCTC TGTTGAACGA GAAATTCAGC GAGCTCTACA TCGCAAAATT
GAACTTAAAT CGGGTGGTTA TTTAATTATT GATCAAACCG AAGCGATGAC TACTATTGAT
ATAAATACCG GTGCTTTTGT TGGGCATCGT AACTTAGCTG ATACCATATT TAGTACCAAT
ATTGAAGCGA CACAAGTTAT CGCGAGGCAA CTAAGGTTGA GAAACCTTGG TGGTATTATT
ATTGTCGATT TTATTGATAT GCATAATGAC GATCATAAAC GTCGCGTATT GCATAGCCTA
GATATGGCAA TGAGCAAAGA CAAGGTTAAA TATAGTCTTC ATGGTTTTTC AGCGCTTGGT
TTAGTTGAAA TGACACGACA AAGAACACGT GAAAGCTTAG AGCACGTATT ATGTGGTGAA
TGCCCACTTT GTACAGGTCG TGGTCATCTA AAAACAGTAG AAACAGTTTG TTTTGAAGTA
CTCAGAGAAA TTGTACGTGT AAATCGTGCT CATGATGCCG ATAAGTTCAC CGTTTATGCG
TCAACTGCAG TGAGTAATTC GCTGGTTAAT GATGAATATC ATAACTTAGC TGAAGTTGAA
GTTTTTATTG GGAAGTTGAT TAAAGTACAA GCCGAACCCA TGTATAATCA AGAACAATTT
GATGTTGTTA TGATGTAA
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| Protein sequence | MSAELLINVT PSETRVALIE NGSLQEVHIE RQAKRGIVGN IYLGKVIRVL PGMQAAFVDI
NLDKAAFLHA SDINSKLILK EETDQVPDIR SLVHEGQHIM VQVVKDPLGS KGARLTTDIT
IASRYLVLMP NSQHAGISLR IENPNERDRL KDIVTPYCDE QQGFIVRTAG EGADELDLQH
DAEFLRRVWH KVLARKQRKQ TNLPLYQDLS LSFRVLRDFV GINLERIRID SNLTFQELTV
FTEEFVPELT PLLEYYPGEL PIFDLFSVER EIQRALHRKI ELKSGGYLII DQTEAMTTID
INTGAFVGHR NLADTIFSTN IEATQVIARQ LRLRNLGGII IVDFIDMHND DHKRRVLHSL
DMAMSKDKVK YSLHGFSALG LVEMTRQRTR ESLEHVLCGE CPLCTGRGHL KTVETVCFEV
LREIVRVNRA HDADKFTVYA STAVSNSLVN DEYHNLAEVE VFIGKLIKVQ AEPMYNQEQF
DVVMM
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