Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4546 |
Symbol | |
ID | 3519368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4797173 |
End bp | 4798027 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637286986 |
Product | hypothetical protein |
Protein accession | YP_271194 |
Protein GI | 71279127 |
COG category | [R] General function prediction only |
COG ID | [COG1660] Predicted P-loop-containing kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.820561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA TCATTGTTAG TGGTCGCTCA GGCTCAGGTA AATCGGTTGC ACTAAGAGTT TTAGAAGATC TTGGTTATTA TTGTGTAGAC AACATCCCTA TTAATCTTCT GCCGGCATTA ACCCATACTG TTATCAATGA CTATGAAAAC GTTGCGGTAA GTCTCGATGT TCGAAACTTA CCGAAAGACC CAGAAGATAT CCCAGAAATT ATTGCTTATT TACCTAAAGC AGTAGACGTT AACACGTTAT TTTTAGATGC CGATGATAAT GACTTAATCA GACGCTTTAG TGAAACACGC CGTTTGCATC CCCTTATTAA AGAGAATATG GCACTTGATC AAGCAATTGC TTTAGAAAAA TCATTACTCG AGCCTATATC TACTAATGCC GATCTATATA TAAATACCAG TCAACTTAGC CCTCATCAAT TGGCTGATTT AGTCAGAGAG CGGATTTTAG GTAAAAAAAC AGGCTCTATG GTATTAGTAT TTGAATCGTT TGGTTTTAAA CACGGTATTC CTGTTGATGC TGATTATGTA TTTGACGCTA GATTCTTACC TAATCCATTT TGGGAAAAAT CACTCAAAGG TCAAACAGGC GTCGATCAAG AAGTAAAAGA CTTTCTTGCC AGCCAAGCTA TTGTTACTAA ATTTATTTGG CAAATTAACA GTTTTATGAT GACTTGGTTA CCACATCTAG AACGAAATAA TCGTAGCTAT GTGACTATAG CCATTGGTTG TACTGGTGGT AAGCATAGAT CTGTTTATAT CGCTGAGATG TTAGCTAAGA ATTTCCGTAA AGAGCGTGAT GATATACAAA CGCATCATAG AGATATTGAT ATTAAATCCA CCTAA
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Protein sequence | MKLIIVSGRS GSGKSVALRV LEDLGYYCVD NIPINLLPAL THTVINDYEN VAVSLDVRNL PKDPEDIPEI IAYLPKAVDV NTLFLDADDN DLIRRFSETR RLHPLIKENM ALDQAIALEK SLLEPISTNA DLYINTSQLS PHQLADLVRE RILGKKTGSM VLVFESFGFK HGIPVDADYV FDARFLPNPF WEKSLKGQTG VDQEVKDFLA SQAIVTKFIW QINSFMMTWL PHLERNNRSY VTIAIGCTGG KHRSVYIAEM LAKNFRKERD DIQTHHRDID IKST
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