Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4542 |
Symbol | |
ID | 3523101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4793632 |
End bp | 4794372 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286982 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_271190 |
Protein GI | 71282626 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.979233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAACAA CACCTGTAAA TACACTGATT GCCGATGGTT TATCGAAGTC TTATAAAAGT AGACAAGTCG TTAAGAATGT TAGTTTGCAA GTTGACGCAG GACAAATAGT TGGCTTATTA GGCCCCAATG GCGCCGGAAA AACCACATCC TTTTATATGA TTGTTGGCTT AGTCCCCAAT GACAATGGCT CGATCAAACT CAACGGTCAA GACCTTACCC TTGCTCCTAT GCATGAAAGA GCCCGAAGCG GTATTGGCTA TTTACCTCAA GAAGCCTCAA TTTTTAGAAA GCTAACTGTT TCTGATAATA TTATGGCGAT ATTACAAACA CGTAAAGAGC TTAGTGAAAC CCAGCGCGCT GAGAAACTTG AAAATTTATT AGAAGAGTTT CACATTTGTC ATATCAAAGA CAATACCGGC ATGAGCTTAT CCGGTGGCGA AAGACGAAGA GTTGAAATTG CCCGAGCACT CGCTGCAGAT CCTCAATTTA TTTTATTAGA TGAGCCCTTT GCTGGTGTTG ACCCAATTTC GGTTGGCGAC ATTAAAAAAA TCATCTTACA CTTAAAGCAG CGAGGCATAG GTATCTTGAT AACAGACCAT AATGTGAGAG AAACATTAGA CGTTTGTGAG CATGCTTATA TAGTTAGTCA TGGTGAAATT ATTGCGCAAG GTAATGCAGA TCAAATTCTT GCTAATCAAA AAGTCAGAGA TGTATACCTT GGCGAACAAT TCACGCTATA G
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Protein sequence | MKTTPVNTLI ADGLSKSYKS RQVVKNVSLQ VDAGQIVGLL GPNGAGKTTS FYMIVGLVPN DNGSIKLNGQ DLTLAPMHER ARSGIGYLPQ EASIFRKLTV SDNIMAILQT RKELSETQRA EKLENLLEEF HICHIKDNTG MSLSGGERRR VEIARALAAD PQFILLDEPF AGVDPISVGD IKKIILHLKQ RGIGILITDH NVRETLDVCE HAYIVSHGEI IAQGNADQIL ANQKVRDVYL GEQFTL
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