Gene CPS_4542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4542 
Symbol 
ID3523101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4793632 
End bp4794372 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content40% 
IMG OID637286982 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_271190 
Protein GI71282626 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.979233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACAA CACCTGTAAA TACACTGATT GCCGATGGTT TATCGAAGTC TTATAAAAGT 
AGACAAGTCG TTAAGAATGT TAGTTTGCAA GTTGACGCAG GACAAATAGT TGGCTTATTA
GGCCCCAATG GCGCCGGAAA AACCACATCC TTTTATATGA TTGTTGGCTT AGTCCCCAAT
GACAATGGCT CGATCAAACT CAACGGTCAA GACCTTACCC TTGCTCCTAT GCATGAAAGA
GCCCGAAGCG GTATTGGCTA TTTACCTCAA GAAGCCTCAA TTTTTAGAAA GCTAACTGTT
TCTGATAATA TTATGGCGAT ATTACAAACA CGTAAAGAGC TTAGTGAAAC CCAGCGCGCT
GAGAAACTTG AAAATTTATT AGAAGAGTTT CACATTTGTC ATATCAAAGA CAATACCGGC
ATGAGCTTAT CCGGTGGCGA AAGACGAAGA GTTGAAATTG CCCGAGCACT CGCTGCAGAT
CCTCAATTTA TTTTATTAGA TGAGCCCTTT GCTGGTGTTG ACCCAATTTC GGTTGGCGAC
ATTAAAAAAA TCATCTTACA CTTAAAGCAG CGAGGCATAG GTATCTTGAT AACAGACCAT
AATGTGAGAG AAACATTAGA CGTTTGTGAG CATGCTTATA TAGTTAGTCA TGGTGAAATT
ATTGCGCAAG GTAATGCAGA TCAAATTCTT GCTAATCAAA AAGTCAGAGA TGTATACCTT
GGCGAACAAT TCACGCTATA G
 
Protein sequence
MKTTPVNTLI ADGLSKSYKS RQVVKNVSLQ VDAGQIVGLL GPNGAGKTTS FYMIVGLVPN 
DNGSIKLNGQ DLTLAPMHER ARSGIGYLPQ EASIFRKLTV SDNIMAILQT RKELSETQRA
EKLENLLEEF HICHIKDNTG MSLSGGERRR VEIARALAAD PQFILLDEPF AGVDPISVGD
IKKIILHLKQ RGIGILITDH NVRETLDVCE HAYIVSHGEI IAQGNADQIL ANQKVRDVYL
GEQFTL