Gene CPS_4541 details

Gene Information

• Locus tag: CPS_4541
• ID: 3523247
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4793022
• End bp: 4793627
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637286981
• Product: OstA family protein
• Protein accession: YP_271189
• Protein GI: 71277840
• COG category: [S] Function unknown
• COG ID: [COG1934] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03002] lipopolysaccharide transport periplasmic protein LptA

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTA ATTTAATTAA AAAAACAGTT TCAGTTTTAG CCGTAGCCTC AAGTTTACTC 
TTTGTCAGTA ACGCTTTGGC GGCAATAAAA GATTTGGAAC AGGAAATAAT TATAGTCGCT 
GAAAGTCAAG ATGCCGATCT AAAAAATAAA ATTATCAGTT ATTTAGATAA TGTTATTATT 
CGTCAAGGCT CTATTTCTAT TACCGCCGAT GTAGTTAAAG TCTTTAGTCA AGTTAATAAG 
AAGAATGATG AAAAAAATGA AACTTATTTG GCAAAAGGCA AACCTGCTAT ATTCGAGCAA 
CAACTAGAAG ATGGTAGCTT AATTACCTTG CAGGCAGATG AAATAACCTA TAGCCCTAAC 
TCGAATACAA TCATTATTTC AGGTAATGCC CTAGTCAAGC AAGCTGGAAG TGAAGTCAGT 
GGTAATGAAA TAACTTATAA TACTGTCAGT GAAAAACTAC AAGCACGGAG CGCTAATAAT 
CAGCCTGTTA CTACTATTTT ACAACCAACG GTACTCAAGA AACAGAAAGA GACTTACGAA 
AAATCTAAAG AAGAAAAACC AACTGACAAG GTAGTAGAAA AAGAAGGCGA CAGTAGTGAC 
AACTAA 

 

Protein sequence

MKVNLIKKTV SVLAVASSLL FVSNALAAIK DLEQEIIIVA ESQDADLKNK IISYLDNVII 
RQGSISITAD VVKVFSQVNK KNDEKNETYL AKGKPAIFEQ QLEDGSLITL QADEITYSPN 
SNTIIISGNA LVKQAGSEVS GNEITYNTVS EKLQARSANN QPVTTILQPT VLKKQKETYE 
KSKEEKPTDK VVEKEGDSSD N