Gene CPS_4534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4534 
Symbol 
ID3522873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4787489 
End bp4787962 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content38% 
IMG OID637286974 
Productmce family protein 
Protein accessionYP_271182 
Protein GI71282399 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.623769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTCTA AGAAAGTAGA ATTATTGGTA GGTTTTTTTG TTGCATTAGG TTTAGCGGCC 
TTATTGATGT TATCACTTAA AGTCGCAGAC TCAGGTATAG GTGGTAATGG TGAAAGTTAT
CAGCTTTTTG CTAAATTCGA TAATATTGGT GGCTTAAAAG TGCGCTCACC GATCAAAGTA
GGTGGGGTTG TTGTTGGTCG TGTTAGTGAT ATTTCATTAG ATGAAGAAGA CTATACACCA
GTAGTTACTC TTGAAATTTA TACACAATAT AATAAGTTCT CAGAAGCTAC TTCTGTCGCA
ATATTAACTG CAGGTTTATT AGGTGAGCAG TATTTAGGTG TGCAACCTGG TTTTGTAGAT
GAGTCCGTAG ATACTTTGCA GCCAGGCGAC TTTATTGAAG ACACGAAACC AGCATTAGTA
CTAGAAGAAT TGATAGGACA GTTTTTATTT AGCCAAGGAA GTGGTGAGGA GTAG
 
Protein sequence
MVSKKVELLV GFFVALGLAA LLMLSLKVAD SGIGGNGESY QLFAKFDNIG GLKVRSPIKV 
GGVVVGRVSD ISLDEEDYTP VVTLEIYTQY NKFSEATSVA ILTAGLLGEQ YLGVQPGFVD
ESVDTLQPGD FIEDTKPALV LEELIGQFLF SQGSGEE