Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4534 |
Symbol | |
ID | 3522873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4787489 |
End bp | 4787962 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286974 |
Product | mce family protein |
Protein accession | YP_271182 |
Protein GI | 71282399 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.623769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGTCTA AGAAAGTAGA ATTATTGGTA GGTTTTTTTG TTGCATTAGG TTTAGCGGCC TTATTGATGT TATCACTTAA AGTCGCAGAC TCAGGTATAG GTGGTAATGG TGAAAGTTAT CAGCTTTTTG CTAAATTCGA TAATATTGGT GGCTTAAAAG TGCGCTCACC GATCAAAGTA GGTGGGGTTG TTGTTGGTCG TGTTAGTGAT ATTTCATTAG ATGAAGAAGA CTATACACCA GTAGTTACTC TTGAAATTTA TACACAATAT AATAAGTTCT CAGAAGCTAC TTCTGTCGCA ATATTAACTG CAGGTTTATT AGGTGAGCAG TATTTAGGTG TGCAACCTGG TTTTGTAGAT GAGTCCGTAG ATACTTTGCA GCCAGGCGAC TTTATTGAAG ACACGAAACC AGCATTAGTA CTAGAAGAAT TGATAGGACA GTTTTTATTT AGCCAAGGAA GTGGTGAGGA GTAG
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Protein sequence | MVSKKVELLV GFFVALGLAA LLMLSLKVAD SGIGGNGESY QLFAKFDNIG GLKVRSPIKV GGVVVGRVSD ISLDEEDYTP VVTLEIYTQY NKFSEATSVA ILTAGLLGEQ YLGVQPGFVD ESVDTLQPGD FIEDTKPALV LEELIGQFLF SQGSGEE
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