| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4519 |
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| Symbol | hepA |
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| ID | 3521098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4768647 |
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| End bp | 4771574 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286959 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_271167 |
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| Protein GI | 71280630 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTTC AGGTAGGTCA GCGTTGGATC AGTGACAGTG AATCAGATCA AGGATTAGGT
ACAGTAACAG GGGTTGAACA CCGCTTTGTT AATATTGTTT TCACTGCTAC AGGTGAATCC
CGCAAATATG CTAAAGATAA TGCCCCACTA ACGCGTGTTA TATTTAATAA AGATGACCTT
ATTCCTAGCC ACGAAGGCTG GTCTTTAAAG GTAATTTCAC ATAGTGAAGC CCAAGGTATC
ATCAGCTATG AAGGTATACG CCAAGATACC AATGAGCAAA TCATCCTAAA AGAAGTGATG
ATAGATCACT TTATTAAATT CAATAAACCT CACGACCGCT TACTTAATAG CCAAGTTGAT
CGTTTAGACT GGTTCCGCTT GCGCAAAGAT TGTTTACAAC ATCAGTATCA ACAGCAGCAA
TCTGATTTAA CAGGTTTGAC GGGCGGTCGA GTCAGCTTAA TACCACACCA GCTTTACATT
GCCGATGAAG TCGGTAATCG CTTTGCTCCG AGAGTTTTAC TTGCCGATGA AGTTGGCTTA
GGTAAAACAA TTGAAGCCGG TTTAATAATC CACCAGCAAT TAGTCACTGG TCGTGCAAAA
AGAATTTTGA TCATCGTGCC GGAATCTTTA ATGCATCAAT GGCTGGTTGA AATGCTACGC
CGATTTAACC TTAACTTTAG CATTTTTGAT AATGAACGCT GTGTTGAAAC CAGCCAGGAT
AACTATGTTG ATGGTAAGAA AGCTAATCCT TTTAGTTCAG AACAATTGGT ATTGGTTAAT
CTAGGTTTTA TCACTAATAA TCCACAATGG TTCGACGCAC TGGTTAGTGA AGATTGGGAT
TTGATGGTTG TCGATGAAGC GCATCACTTA AACTGGCAAC AAGATAAACC TAGTATTGAA
TACCAATGTA TTGAACAACT CGCGCAAGTT ATCCCTGGAG TTTTATTATT AACCGCTACT
CCTGACCAAT TAGGTCATGA AAGTCACTTT GCTCGCTTGC GTTTACTTGA TGCTGACCGT
TTTTATGATT ATCAAAAATT TACCGAAGAA GAGTCCCACT ATAGTGAAGT TGCTGATGCC
GCCAATGCAT TAGTTGAAGG GAAGCCCCTT TCTAGTGAGC AAGAGACAAC ACTCTCTGAT
TTATTGAAAG AAACTGATAT CAGCATTCAA CTAACAGAGT TAAACCAAGC AGACAGTAAA
GAATCAGCAA AAGTACGCCA AGGTTTATTA AAACAGTTAC TCGACAGACA TGGTACTGGT
CGTATCTTGT TTAGAAACTC TCGAAATACT ATTAAAGGTT TTCCTGCCCG CCAAGTAGTG
CCTACAGTAC TTATTATGCC CGAGCAATAT CAAGAAAATA TTAATGAGTT TATGCTCAGT
GACTGCCCAG AAGCCCTAGC TAAATCAAAG CAGGCTAAAT ATATTTTCAC TCCAGAAATG
CTACACGGCT TGGATCAACG AAATGATACG TGGACTGATT TTGATCCTAG AGTTGATTAT
TTAATTGACC TATTACAGTC GCTTAAAAGA GAAAAAGTCT TAGTCATTTG TGCAAACGCC
CAAACAGCTA TTGATTTAGA AGCCGTTCTT CGTATTAAAG AAGGTATCCG CAGCGCTGTT
TTCCATGAAG GTCTATCGAT ATTTGAACGC GATAAGGCTG CCGCCTATTT TGCCCAAGAC
GAAGATAGTG CTCAATTATT GCTTTGTTCT GAGATTGGTA GTGAAGGGCG TAATTTTCAA
TTTGCTCATC ATCTAGTACT TTTTGACTTA CCAAGTAACC CTGATTTATT AGAGCAACGC
ATTGGCCGCT TAGACAGGAT CGGACAAACA GAGATAATCC GTATTCATGT GCCTTACTTT
GCAGATTCGG CACAGCAATT ATTATTTGAT TGGTACCAAC AAGGTATGCA AGCATTTGAG
CATACTTGTA TTACGGGTCG AGTGGTTTTT GAAACCTTCG GTGAGCAATT ACTCTCATTA
GCATTAAGCT GCCAGCAGCA GTCAGTTGAG GCAGAATCAC TCATCAGTGA TAGTTGGCAG
AAACATTTAT CTATTAAAGC GGAATTAGAA TCTGGCCGAG ATAAATTATT AGAGCTGAAC
TCATCTGGAC AAGGTCGTGC ACATGAGTTA GTTGAAAAAA TCCAACAAGT TGATAACGAC
ATAAACTTGC CTCAATTTAT GTTTCAAGCA CTAGATGTTT TTGGTGTGCA GCAAGATGAT
AAAGCCGATA ATGCTATTGC CTTAAATCAA AGCGAGCATA TGCTTAATAG TAACTTCCCT
TGCTTACCTG AAGACGGCAC TACGGTTACT TTTGATAGAG AAACAGCCTT AGTTAATGAA
AATTATCAAT TATTAACGTG GGATCATCCT ATGGTTCGTG GGGTAATGGA TTTGGTCTTG
AGCGATGAAA TTGGTAACGC CAGTATTGGT TTATTAAAAA ATGAAGCGTT ACCAGTAGGC
ACATTTTTCC TTGAATGCTT ATTTACTGTT GAAGCTACCG CCCCTGCTCA TTTACAGTTA
GGTCGTTATT TACCTACTAC GCCAATTCGT ATTCTGGTAG ACAAAAATGG CAATAATTTA
GCCGACAAAG TCAGTGAAAA AGTACTTGAT AAACAATTAT CACCGGTTAA AAAGCAAATG
GCATTACAAC TTATCAAAGC ACTTAAGACC CAAATAACGC CTTTGGTTGC AAAAGCAGAA
ATACACGGCG AGCAACACAT TGTTGAAATT CAAAAGAAAT CTTTAGCTGC TATGCAAAGT
AAACTCTCAT TAGAGCATCA TAGGTTAACC GCATTAAAAG CGATTAACCC AAGTGTGCGC
CAAGAAGAGA TTGACTTTAT TAGCCAACAA CAAGATGAAT TGAGCCACTA TATTGATAAA
GCGCAATTGA CCTTTGAAGC CATTCGCATG ATAGTAGTTA CTCACTAA
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| Protein sequence | MPFQVGQRWI SDSESDQGLG TVTGVEHRFV NIVFTATGES RKYAKDNAPL TRVIFNKDDL
IPSHEGWSLK VISHSEAQGI ISYEGIRQDT NEQIILKEVM IDHFIKFNKP HDRLLNSQVD
RLDWFRLRKD CLQHQYQQQQ SDLTGLTGGR VSLIPHQLYI ADEVGNRFAP RVLLADEVGL
GKTIEAGLII HQQLVTGRAK RILIIVPESL MHQWLVEMLR RFNLNFSIFD NERCVETSQD
NYVDGKKANP FSSEQLVLVN LGFITNNPQW FDALVSEDWD LMVVDEAHHL NWQQDKPSIE
YQCIEQLAQV IPGVLLLTAT PDQLGHESHF ARLRLLDADR FYDYQKFTEE ESHYSEVADA
ANALVEGKPL SSEQETTLSD LLKETDISIQ LTELNQADSK ESAKVRQGLL KQLLDRHGTG
RILFRNSRNT IKGFPARQVV PTVLIMPEQY QENINEFMLS DCPEALAKSK QAKYIFTPEM
LHGLDQRNDT WTDFDPRVDY LIDLLQSLKR EKVLVICANA QTAIDLEAVL RIKEGIRSAV
FHEGLSIFER DKAAAYFAQD EDSAQLLLCS EIGSEGRNFQ FAHHLVLFDL PSNPDLLEQR
IGRLDRIGQT EIIRIHVPYF ADSAQQLLFD WYQQGMQAFE HTCITGRVVF ETFGEQLLSL
ALSCQQQSVE AESLISDSWQ KHLSIKAELE SGRDKLLELN SSGQGRAHEL VEKIQQVDND
INLPQFMFQA LDVFGVQQDD KADNAIALNQ SEHMLNSNFP CLPEDGTTVT FDRETALVNE
NYQLLTWDHP MVRGVMDLVL SDEIGNASIG LLKNEALPVG TFFLECLFTV EATAPAHLQL
GRYLPTTPIR ILVDKNGNNL ADKVSEKVLD KQLSPVKKQM ALQLIKALKT QITPLVAKAE
IHGEQHIVEI QKKSLAAMQS KLSLEHHRLT ALKAINPSVR QEEIDFISQQ QDELSHYIDK
AQLTFEAIRM IVVTH
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