| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4518 |
|---|
| Symbol | |
|---|
| ID | 3523054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 4766951 |
|---|
| End bp | 4768387 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637286958 |
|---|
| Product | PhoH family protein |
|---|
| Protein accession | YP_271166 |
|---|
| Protein GI | 71282579 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATG AGAATATGTT AAGTGATAAT TCAACCCAAA CGTCTCAAAT CAACGAGACA
ATTGACCAAC CTATTATCTA TATATTAGAT ACCAATATCC TTTTGCACGA ACCTTTCGCT
TTTTTATCTT TTAAAGAGCA CGATGTCGTT GTACCCATGA CAGTGCTGGA AGAACTCGAC
TCAATTAAAG ATAGGCGAAA AGATGTCAGC CGTGATGCTA GAGTTGCTAT ACGAGCGCTT
GAAGATACGT TACGAGATGC CAGTCCAGAG CAAGTACTTG CTGGCGTAAA ACTACCTCAA
AACGATGACC AACACCCCAG TGGCAGCCTC GCCATTATTA ATGATTATGC CCTTGAGAAA
ACTGCACACA CCTTATCTTT CAATGAAAAT GATAACCGTA TCATTAACGC GGCTTTGCAT
ATTCAAAAGA AAACTCCAAA TAAAAAAATA GTCTTGGTCA CTAAAGATAT CAATATGCGC
TTGAAAGCCA AGGGAGCAGG TCTGGCACAC GTAGAGGATT ATAGAACTGA TCAGCTCATT
GATGATATCC AATTTTTAAC GAAAGGCTAC CATAAATTTG AGGGAGACTT TTGGCAACAA
ATTCAATCCG TTGATAGCGA GACGGAAGGA AGAAATACTA CCCATTATGT TTCTCGAGAA
ACAGTACCCT CAACTTACAT CAATGAATAC TTACTTGATG ACAGTGGCAC TTTTGCTGGT
AAGGTTACCG GTTGGGATGA CGATAAACTC GCTATTTTAG ATCTCGGACG TGAACGACTG
TTAGCGAAGA ATGCTTGGGG CATTCATCCT AAAAATATTT ATCAAGGTAT GGCGATGGAT
GCATTATTGG ACCCTACTAT TGATTTAGTT ATCCTTACCG GACCAGCAGG TAGCGGTAAG
ACCTTGTTAG CCTTAGCTTC GGCGTTAGAA CAAGTAATAG AACGTGGTCT TTATGATAAA
ATAATTGTTA CACGTAGTAC TCCTGAAATT GCAGAGTCCA TTGGCTTTTT ACCAGGTACC
GAAGAAGAGA AAATGGCGCC TTGGCTCGCC GCAATAACTG ATTCACTTGA AGTGTTACAT
CAACAAGATG AAAGCATGCA TGGCAGCTTG AACTACATTA TGGATAAAGC CAATATCCAA
TTTAAGTCAG TGAACTTTAT GCGTGGGCGG AGTATTCAAA ATGCCCTAGT ACTGCTTGAT
GAGTGTCAAA ATTTAACAGC GGCTCAGCTA AAAACCATTA TCACTCGCTG TGGTGAAGGA
ACTAAACTCG TTTGCTCGGG AAATTTGGCG CAAATTGATA GTAACTATTT GACTGCAGTA
ACTTCTGGGC TGACTTATAT TGTCGAGCGT TTTAAAGACT TTCCAGGCTC TGCTACTGTT
AACTTAAACG GCGTGGTACG AAGCCGACTT GCTTCCTTTG CAGAGGAAAA TTTATAG
|
|---|
| Protein sequence | MNNENMLSDN STQTSQINET IDQPIIYILD TNILLHEPFA FLSFKEHDVV VPMTVLEELD
SIKDRRKDVS RDARVAIRAL EDTLRDASPE QVLAGVKLPQ NDDQHPSGSL AIINDYALEK
TAHTLSFNEN DNRIINAALH IQKKTPNKKI VLVTKDINMR LKAKGAGLAH VEDYRTDQLI
DDIQFLTKGY HKFEGDFWQQ IQSVDSETEG RNTTHYVSRE TVPSTYINEY LLDDSGTFAG
KVTGWDDDKL AILDLGRERL LAKNAWGIHP KNIYQGMAMD ALLDPTIDLV ILTGPAGSGK
TLLALASALE QVIERGLYDK IIVTRSTPEI AESIGFLPGT EEEKMAPWLA AITDSLEVLH
QQDESMHGSL NYIMDKANIQ FKSVNFMRGR SIQNALVLLD ECQNLTAAQL KTIITRCGEG
TKLVCSGNLA QIDSNYLTAV TSGLTYIVER FKDFPGSATV NLNGVVRSRL ASFAEENL
|
|---|
| |