| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4514 |
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| Symbol | mdh |
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| ID | 3519999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4761471 |
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| End bp | 4762406 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286954 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_271162 |
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| Protein GI | 71279540 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAG CTGTTTTAGG CGCCGCAGGC GGTATTGGTC AAGCATTATC ATTACTATTA
AAAACTCAAT TACCAGCAGG TTCTGAGTTA TCTTTATATG ATGTTGCGCC TGTTGTTCCA
GGTGTTGCTG TAGATTTATC ACACATCCCA ACTGACGTTA AAGTTGCTGG TTTTGGTCGT
GACGACCTTA ACGGTGCATT AACAGGTGCT GATATCGTTT TAATTCCAGC TGGTATGCCG
CGTAAGCCAG GTATGGACCG TGCTGATTTA TTCAACGTAA ATGCTGGTAT TATTAAAGTA
TTGGCTGAAG GCATTGTTGC TAGCTGTCCT AAAGCATTGG TAGGTGTAAT TACTAACCCA
GTTAACGGTA CTGTTCCAAT TGTTGCTGAA GTATTCAAAA AAGCTGGCAC TTATGATGCA
GCTCGTCTTT TCGGTGTTAC TACATTAGAT GTTATCCGCA GTGAAGCTTT TGTTGCTGAA
CTTAAAGGCT TAGATGTTGC TACTGTTAAA GTACCAGTTA TTGGTGGTCA CTCAGGAACA
ACTATTTTAC CATTACTATC TCAAGTTGAA GGCGCTACTT TCTCAGATGA AGAAGTTGCA
GCACTTACTC CTCGCATCCA GAATGCAGGT ACTGAAGTAG TTGAAGCTAA AGCGGGTGGC
GGTTCAGCTA CACTTTCAAT GGGCGCAGCA GCAGCACGTT TTTGTATGTC TTTAGTTAAA
GGTCTACAAG GTGAAGATGT TGTAGATTAC GCTTATGTTG AAGGTAACGG TGCTGATGCA
CAGTTTTTCG CACAACCTGT ACGTTTAGGC GTTAACGGTG TAAGTGAAAT TTTACCTTAC
GGTGAGTTAA GCGCTTTTGA ACAAAAAGCT AAAGAAGATA TGCTTGCTAC CTTGAAAAAA
GATATTCAAG AAGGTGTTGA TTTTATGGCT AGCTAA
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| Protein sequence | MKVAVLGAAG GIGQALSLLL KTQLPAGSEL SLYDVAPVVP GVAVDLSHIP TDVKVAGFGR
DDLNGALTGA DIVLIPAGMP RKPGMDRADL FNVNAGIIKV LAEGIVASCP KALVGVITNP
VNGTVPIVAE VFKKAGTYDA ARLFGVTTLD VIRSEAFVAE LKGLDVATVK VPVIGGHSGT
TILPLLSQVE GATFSDEEVA ALTPRIQNAG TEVVEAKAGG GSATLSMGAA AARFCMSLVK
GLQGEDVVDY AYVEGNGADA QFFAQPVRLG VNGVSEILPY GELSAFEQKA KEDMLATLKK
DIQEGVDFMA S
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