| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4501 |
|---|
| Symbol | gltB |
|---|
| ID | 3519028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4744440 |
|---|
| End bp | 4748900 |
|---|
| Gene Length | 4461 bp |
|---|
| Protein Length | 1486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637286941 |
|---|
| Product | glutamate synthase subunit alpha |
|---|
| Protein accession | YP_271149 |
|---|
| Protein GI | 71278343 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTTT ATGATCATAG CGTCCAAAAG GACAACTGTG GTTTTGGTCT AATTGCCCAT
CAACAGGGTG AAACCAGTCA CAAACTAATT AAGACCGCTA TTTCCGCTTT AGATCGTATG
CAACATCGTG GTGGTATCGC CAGCGATGGT AAAACAGGTG ACGGTTGTGG CCTATTATTG
CAAAAACCAG ACAGTTTTTT TCGCGCCGTA GCCGCCGACA ATAAATGGAA GCTAGGTAAA
AAATATGCTG TCGGCATGAT TTTCCTAAGC CCTGATCCCG TTGAAGCTGC ACTTTCTAAA
AAAGTATTAG AAGAAGAGTT AGCAAATGAA TGCTTAACAT TAATAGGCTG GCGCACTGTA
CCTATCGACA CATCGGTATT AGGTGAAATT GCGATAGGCA ATTTACCAAC GATAGAACAA
GTCTTTGTTG ATGCTCCTCC AGGATGGAGA AACCTAGAGT TAGAGCGACG TTTATATATG
GCGCGTCGTC GCGCTGAAAA GCGTATTACC GACGAAAAAT TTTATGTTGC CAGTTTGTCT
TGTCTAGTAA CAATCTACAA AGGGCTAATG ATGCCTGTAG ATTTACCTAA TTTTTATTTA
GATTTAGCTG ATATTCGCAT GCAAAGTGCT ATCTGTGTAT TCCATCAGCG CTTTTCAACC
AATACCTCGC CACAATGGCA TTTAGCACAA CCTTTCCGCT ATCTAGCGCA CAATGGTGAA
ATCAACACCA TTAACGGTAA CCGTCAATGG AGTCGGGCGA GAACTCACCG CTTTAAATCA
CCATTATTGC CTGACTTACA AGATGCTGCT CCTTTTGTTG GCCAGACAGG CTCCGATTCA
TCATCTTTAG ATAACATGCT TGAACTCTTT TTAGCTGGTG GTATGGATTT ATACCGTGCA
ATGCGCTTAT TGATGCCGCC TGCATGGCAA AACAGTCCGT TAATGGATGA TGATTTACGT
GCCTTCTATG AATTCAACTC TATGCACATG GAACCATGGG ATGGCCCCGC TGGCGTAGTA
ATGACTAACG GCCGCCATGT TGCCTGTAAC CTTGATAGAA ACGGTTTACG CCCTGCTCGT
TATGTTATTA CTCGTAATGG TTTTATTACC CTCGCTTCAG AAGTAGGTAT TTGGGATTAC
GGTGAAGATG AAGTGGTGGA AAAAGGCCGT GTTGGCCCTG GTGAAATGCT CGCCATTGAT
ACCTACACAG GTAAAATATC TCATTCAGCC GATATTGATA ATAATTTAAA GGAACGTCAC
CCTTATAGAG AGTGGTTAAC TAAAAATATT CGCCGACTAG TCCCCTTTGA TCAACTTGAA
GCTAACTTGA TTGGTCAACG TGTATTTACT GATGCAGAGA TGAATCAGTA CCACAAAATG
TTCAATTACA GCTATGAAGA AATTCAGCAA GTCATTCGAA CATTAGCCGA AAATGGCCAA
GAAGCGACGG GTTCTATGGG TGATGATACT CCTATGGCAG TATTATCGAG TCAAACGCGT
ACTTTATATG ACTATTTCCG TCAGCAATTC GCGCAAGTAA CAAACCCGCC AATAGACCCT
TTACGTGAAC GTTATGTGAT GTCACTAGGT ACCTGCATTG GTCGTGAACA TAATGTATTT
AACGAAACGT CGGGTCATGC CGATCGCATG TTGTTTTCAA CGCCAGTGCT TATGTATACC
GGCTTGAAAC AATTACGAGA TTTAGATCCT GAGCATTATC GCTCAGATAC ATTAACGCTA
AGTTTTGATG CAAAAGAAGG TTTAGAAGCC GCTATTAGAC GCTTGTGTAA TGAAGCAGAA
ACACTTGTTC GCGATAGCAG CACTGTTATT TTGGTGTTAT CAGATAGAAA TATCCAACCA
GGTTTACTCG TTATTCCTGC GGCAATGGCT GTCGGCGCGG TACAGAAACG TTTAGTTGAT
CAACAGTTAC GTTGCGACTC TAATATTATT GTAGAAACGG GTTCAGTGCG TGACTCGCAT
CAGTATGCGG TATTACTTGG CTTAGGTGCT ACCGCTATAT ATCCTTATTT AGCGTTTGAA
ACGATTGAGC AATTAGTTGA ACAAAAGCAA ATAGATTTAT CAGCCCGTGA TGCCATCGTT
AATTATCGAG AAGGTATCAA TAAAGGGCTA TTGAAAATAC TCTCTAAAAT GGGTATTTCA
ACCATTGCCA GTTACCGCTG TGCCGGATTA TTTGAAGTTA TCGGCTTAAA TGAAGATATT
ATGGAGCTTT GTTTTAGTGA CTTACCAAGT CGCATTAAAG GAGCTGATTT CAGTGATATT
CAACAAGATG CAGCTAACCT TGCACGCAAA GCATTTTTAC CTCATCAAAA AGTTAATCAT
GGCGGTTTAT TAAAGTACGT TCATGGTGGT GAGTACCATG CCTTTAATCC TAATGTGGTT
AATTATTTAC AACGTGCAGT GCAAAACGGT GATTATAATG ATTATCGTAC TTTCGCCGAT
GAAGTTAATC AGCGCCCAGT AGCCACCCTG CGAGATTTAT TAAAACTTAG GGATGACTGC
GAGCCGATTG AACTTGACCA AGTAGAGTCT GAAGGAGAAA TGTTCAAACG TTTCGATAGC
GCCGCCATGT CAATTGGTGC GCTTAGCCCT GAAGCACATG AAGCACTGGC TATTGCCATG
AACCGTTTAG GTGGTTTTTC AAATTCTGGT GAAGGTGGTG AAGATGAGCG TCGTTTTGGT
ACCGTTAAAA ATTCTCGTAT TAAACAAATT GCCTCAGGGC GCTTTGGCGT AACCCCACAC
TACTTAGTCA ATGCAGATGT CTTACAAATT AAAGTAGCGC AAGGGGCAAA ACCTGGTGAA
GGTGGGCAGT TGCCTGGTGA TAAAGTATCG CCATTAATTG CTAAATTACG TTACTCAGTA
CCTGGTGTTA CCTTAATTTC TCCGCCACCG CATCATGACA TTTATTCTAT TGAAGATTTA
GCTCAGCTTA TTTTTGACTT AAAACAAGTG AATCCAAAAG CGGTTATATC AGTGAAATTG
GTCTCTGGAC CAGGCGTTGG TACCATTGCG TCGGGTGTTG CTAAAGCGTA TGCCGATTTT
ATTACCATCT CAGGTTACGA CGGTGGTACT GCCGCCAGCC CACTTAGTTC AGTAAAATAT
GCAGGTTGTC CTTGGGAACT AGGTTTAGCA GAAGCTCATC AGTCATTGGT AACCAATGGT
TTGCGCCATA AAGTGCGTCT ACAAGTTGAC GGTGGTTTAA AAACCGGTGT TGATATTGTT
AAAGCGGCTA TTTTAGGCGC TGAAAGCTTC GGCTTTGGTA CTGCACCTAT GGTAGCACTA
GGCTGTAAAT TTCTCCGTAT ATGTCACCTA AATAACTGTG CTACTGGCGT TGCAACGCAA
GATGAGGTTT TACGCGAGCA GTTCTTTAAA GGCTTACCTG ATCAAGTAAT GAATTATTTT
AAATTTATTG CCCGTGAAGT ACGTGAAATT CTTGCCGGTC TTGGTGTAAA AAGTTTAACT
GAGATCATAG GCAGAACTGA CTTATTAATA CAGATTGATG GACTTACGTC TAAACAAAGT
AAATTAGATT TATCACCGAT AATCGCACCT GTTGTTGCCG GTGAAAATAC GGCACTTCAT
CAGACAGAAG AAAACACTGC ATTTGATAAA GGTCAGTTAA ATCAGAAAAT TTTAGCTGCC
ACCAGTGATT CGGTGTCTCA TAGTAAAGGC GGTGAATATC GTTTTACTAT TCAAAATACT
GACCGCTCTG TTGGAGCAAC CTTATCCGGT GAAATTGCTC GTCATCATGG CGATCAAGGA
ATGGCGTCTT CTCCGATTAC AATACATCTA TCAGGTACTG CAGGACAAAG TTTTGGTGTT
TGGAATGCTG GTGGTTTGAA CATGATTTTA ACCGGTGATG CCAACGATTA TGTCGGTAAA
GGTATGGCGG GAGGTAAACT CACGATCAAG CCCCCTGTTG GTGTTGAATA CGCTAGCCAT
AAAACGATGA TTATGGGCAA TACTTGTCTA TATGGTGCTA CTGGCGGGGT GTTATTCTCT
TCAGGTCGTG CTGGTGAACG TTTTGCTGTA CGAAATTCAG GTTGTCATGC AGTTGTCGAA
GGCACTGGTG ATCATGCCTG TGAATATATG ACTGGCGGTA TAGTTACTAT ACTAGGAGAT
ACAGGTGTTA ACTTTGGTGC AGGAATGACC GGCGGTTTCG CATACATATT AGATGAAACA
GGTGACTTAG ATGTTCGTCT GAACAAAGAA TCTATTGAAA TGTTGGCTAT TGAAGATTTA
ACCATTCACC AAGAACATTT ACGTGGCATC ATCAATCAAC ATTTTGAAGA AACGGGTAGC
TTGCGCGCTC ATGAAATGCT TCATGACTTT GATCGATATG CACCCTTATT TAAACTGATT
AAACCGACAG CTACCGATGT AAAGACCTTA TTAGGTCACC GTAGTCGTTC AAGTGCTGAA
CTTCGTGTCC AAGCACAATA A
|
|---|
| Protein sequence | MQLYDHSVQK DNCGFGLIAH QQGETSHKLI KTAISALDRM QHRGGIASDG KTGDGCGLLL
QKPDSFFRAV AADNKWKLGK KYAVGMIFLS PDPVEAALSK KVLEEELANE CLTLIGWRTV
PIDTSVLGEI AIGNLPTIEQ VFVDAPPGWR NLELERRLYM ARRRAEKRIT DEKFYVASLS
CLVTIYKGLM MPVDLPNFYL DLADIRMQSA ICVFHQRFST NTSPQWHLAQ PFRYLAHNGE
INTINGNRQW SRARTHRFKS PLLPDLQDAA PFVGQTGSDS SSLDNMLELF LAGGMDLYRA
MRLLMPPAWQ NSPLMDDDLR AFYEFNSMHM EPWDGPAGVV MTNGRHVACN LDRNGLRPAR
YVITRNGFIT LASEVGIWDY GEDEVVEKGR VGPGEMLAID TYTGKISHSA DIDNNLKERH
PYREWLTKNI RRLVPFDQLE ANLIGQRVFT DAEMNQYHKM FNYSYEEIQQ VIRTLAENGQ
EATGSMGDDT PMAVLSSQTR TLYDYFRQQF AQVTNPPIDP LRERYVMSLG TCIGREHNVF
NETSGHADRM LFSTPVLMYT GLKQLRDLDP EHYRSDTLTL SFDAKEGLEA AIRRLCNEAE
TLVRDSSTVI LVLSDRNIQP GLLVIPAAMA VGAVQKRLVD QQLRCDSNII VETGSVRDSH
QYAVLLGLGA TAIYPYLAFE TIEQLVEQKQ IDLSARDAIV NYREGINKGL LKILSKMGIS
TIASYRCAGL FEVIGLNEDI MELCFSDLPS RIKGADFSDI QQDAANLARK AFLPHQKVNH
GGLLKYVHGG EYHAFNPNVV NYLQRAVQNG DYNDYRTFAD EVNQRPVATL RDLLKLRDDC
EPIELDQVES EGEMFKRFDS AAMSIGALSP EAHEALAIAM NRLGGFSNSG EGGEDERRFG
TVKNSRIKQI ASGRFGVTPH YLVNADVLQI KVAQGAKPGE GGQLPGDKVS PLIAKLRYSV
PGVTLISPPP HHDIYSIEDL AQLIFDLKQV NPKAVISVKL VSGPGVGTIA SGVAKAYADF
ITISGYDGGT AASPLSSVKY AGCPWELGLA EAHQSLVTNG LRHKVRLQVD GGLKTGVDIV
KAAILGAESF GFGTAPMVAL GCKFLRICHL NNCATGVATQ DEVLREQFFK GLPDQVMNYF
KFIAREVREI LAGLGVKSLT EIIGRTDLLI QIDGLTSKQS KLDLSPIIAP VVAGENTALH
QTEENTAFDK GQLNQKILAA TSDSVSHSKG GEYRFTIQNT DRSVGATLSG EIARHHGDQG
MASSPITIHL SGTAGQSFGV WNAGGLNMIL TGDANDYVGK GMAGGKLTIK PPVGVEYASH
KTMIMGNTCL YGATGGVLFS SGRAGERFAV RNSGCHAVVE GTGDHACEYM TGGIVTILGD
TGVNFGAGMT GGFAYILDET GDLDVRLNKE SIEMLAIEDL TIHQEHLRGI INQHFEETGS
LRAHEMLHDF DRYAPLFKLI KPTATDVKTL LGHRSRSSAE LRVQAQ
|
|---|
| |