| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4498 |
|---|
| Symbol | |
|---|
| ID | 3522549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4743073 |
|---|
| End bp | 4743999 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637286938 |
|---|
| Product | putative GTP cyclohydrolase |
|---|
| Protein accession | YP_271146 |
|---|
| Protein GI | 71282077 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1469] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAT CAATGCCAGA TATCGCCAAC CATACAACAG CTCAAACCGA AGGTACACTT
GACTGGGTCG GCATGAGTAA CATTGAAATG CCTATTATGG TTGCCTCAAA AGGTGAAAGT
GAGCGTATGG TCTCTGCTCA TATTGATGCC TTTGTGAACT TAAAAGATGC ACAAGCTAAA
GGCATACATA TGTCGCGTCT TTATCTACTT ATCGATGAAT TATCTACAAG TAATATACTT
AACTATCAAA GTTTAGTGAG TTTGCTTGAT GGATTTATTA GTAGTCACCA AGAATTAAGT
GACCAAGCTA AAGTACAATT TTGCTTTGAT TATCATTTAC GTAGAAAATC ATTAATCAGT
GGTAAAGAAG GTTGGAAAGC TTACCCGGTA ACGCTAACAG GAAACCTAAA TCAAGGTAAA
CTCACTATCG AGCTAACTAT TGATGTACCT TATTCTTCAA CTTGTCCATG CTCTGCGGCC
CTTGCAAGGC AGTTGATACA AAAAGCTTTT CAAGATAAGT TTGCTCAACA AAGCGAACTG
GCATTAACTG ATGTTCATGA TTGGTTAGGC ACAACAGAAG GAATCGTAGC AACTCCTCAT
TCTCAACGTT CTGTTGCCGA AGTAAAAGTA AAACTAAATT CTAGTATTAA TGACTTTCCT
ATTACCGAGA TAGTTGACCT GGTTGAAAAC TCTCTAAAAA CACCGGTACA AGCTGCAGTC
AAACGCGAAG ATGAGCAAGA GTTTGCTCGC CTAAATGGTC AAAACTTAAT GTTTTGTGAA
GATGCTGCTC GTCGTTTACA GCATAGTCTG AATCAAACAG ATCAATTTGA TGACTTCTGG
TTACGGATAA ATCATTTAGA GTCTCTTCAT GCCCATGACG CTGTTAGTGT AACGACCAAG
GGTATCAAGG ATGGCTATCA GCCATAG
|
|---|
| Protein sequence | MTTSMPDIAN HTTAQTEGTL DWVGMSNIEM PIMVASKGES ERMVSAHIDA FVNLKDAQAK
GIHMSRLYLL IDELSTSNIL NYQSLVSLLD GFISSHQELS DQAKVQFCFD YHLRRKSLIS
GKEGWKAYPV TLTGNLNQGK LTIELTIDVP YSSTCPCSAA LARQLIQKAF QDKFAQQSEL
ALTDVHDWLG TTEGIVATPH SQRSVAEVKV KLNSSINDFP ITEIVDLVEN SLKTPVQAAV
KREDEQEFAR LNGQNLMFCE DAARRLQHSL NQTDQFDDFW LRINHLESLH AHDAVSVTTK
GIKDGYQP
|
|---|
| |