| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4494 |
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| Symbol | rsmC |
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| ID | 3523004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4738827 |
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| End bp | 4739900 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637286934 |
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| Product | ribosomal RNA small subunit methyltransferase C |
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| Protein accession | YP_271142 |
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| Protein GI | 71282529 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.187247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTTGCC CTATGTCATT GTCAAACCCT AGCCAAATAT TGTTACGTAA TAGTGAATTA
CTTGTAGCTA AAGTTCCTTT ATTTATTAAC TTACCTGAAG ATGGTTTCAT TGAGGCTTAT
ACAGAGATTC ATAAACCAGA CACTATCCAT TGCTTTAATA CAAATTTCAT TGATTATCAG
GCAATTACCA AAAAGCATTG CAGTCCAACA AAGACTAAAA ATGTTAAGGC AACTTTTGCC
AGCACATATC AAACAACAAG CTGTCATGAT CTTGTGATAA TAGCGTTTCC TAAAAGTAAA
GCTGAACTCA ACTTCACGCT TGCTATGATT ACTCATTGCA TAAATGATGA AACAAAAATA
ATACTGGTTG GCGAGAAAAA AGGCGGTATA CAGTCTGCAG CTAAATTAAC TCAACATATA
TTTTCTTGTT GTCAAAAAGT CGATGCTGCA CGCCATTGTC TGCTTTTTGT TGGTCTATTT
CAGCCAGAAA GGTTATCAGA TGTTTTCAAC CTGCAAGATT GGTTCAAAAA ATACCAAATT
ACTGTAGAAG GTATTGAGCT AACAATAGCT TCTTTACCGG GTGTTTTTAG TCAGCAAAAG
CTTGATGTTG GTACCGCATT ATTACTAAGT AATTTACCGA GTAAAATGAC AGGAAAAGTA
CTCGATTTTG GTTGTGGTGC AGGAGTAATC AGTTGCTTTA TTGGCAAGAA ATTTAGCGGT
ACAAACTTAT CTCTATTAGA TGTTAGCGCT TTGGCATTAA CCTCAGCACA AGAGAGTTTA
GCTTTAAACG GTCTATCGGG TAATGTATTC CCATCAAATA GCTTATCGGA TGTTAACGAA
CACTATCAAC ACGTTGTTTC AAACCCTCCA TTTCATCAAG GTGTTAAAAC GCACTACCAA
GCCAGTGAAG ACTTTTTAGC CGGAATAAAT AAAAAACTTA ACAAACAAGG TAACATTACG
ATAGTAGCCA ACAGTTTTTT ACGTTATCAA CCGATCATGG AAACACACAT TGGTAATACT
CGCGTGATAA CAAAAGACAA AGGGTTTACT ATTTACCGAG CTCAGCTATC ATAA
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| Protein sequence | MSCPMSLSNP SQILLRNSEL LVAKVPLFIN LPEDGFIEAY TEIHKPDTIH CFNTNFIDYQ
AITKKHCSPT KTKNVKATFA STYQTTSCHD LVIIAFPKSK AELNFTLAMI THCINDETKI
ILVGEKKGGI QSAAKLTQHI FSCCQKVDAA RHCLLFVGLF QPERLSDVFN LQDWFKKYQI
TVEGIELTIA SLPGVFSQQK LDVGTALLLS NLPSKMTGKV LDFGCGAGVI SCFIGKKFSG
TNLSLLDVSA LALTSAQESL ALNGLSGNVF PSNSLSDVNE HYQHVVSNPP FHQGVKTHYQ
ASEDFLAGIN KKLNKQGNIT IVANSFLRYQ PIMETHIGNT RVITKDKGFT IYRAQLS
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