| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4483 |
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| Symbol | |
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| ID | 3520219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4723988 |
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| End bp | 4727212 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286923 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_271131 |
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| Protein GI | 71279758 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCTA GTGACTTGAA AACAAATGAA AAAAATGACA GTGAAAATTT AAATCGTCCC
CATGATGATA TCGATACAAA TAAAGGCATT ATTGCCTGGT TTGCACGTAA TACTATCGCT
GCCAACCTAC TTATGGTTTT TATCTTAATT GGTGGCGGTT TAACGGCACT AACCATTAAT
AAACAAATGT TTCCCCAGCT AGAGTTTAAC TGGATTTCAT ATGCAGCGCC ATATCCTGGG
GCCGCACCCC AAGAGGTTGA AGAAGGTATT ACCATTAAGA TTGAGGAAGC ACTTAAATCA
GTGCAAGGTC TTAAGCGAGT GATAACATAT TCTAATCGAA ATTACTCCAA CGGCTGGTTT
GAAGTTGAAC TTGATTATGA TCCACAAGTT GTGCTGGAAG AGGTAAAGTC AGCTATTGAC
GCTATTCCAA GTTTTCCTGA AGGAATGGAG CGAATCAAGG TCGAACGAGA GAAATTTCGT
CAAGAGGTGA TGTATATTTC GCTCTATGGT GATTTAACTA ATGGTGAGTT GAAAGAGCTA
GGTCGTAAAA TTCATAATGA AATACAGCAA CTACCAGGTA TCAGTATTTC TGAGCTATAT
AGTGGCTTAG CTTATGAAAT ATCAGTTGAA GTAAGTAAAG ATAAATTACG TGAATACGGC
TTAAGTTTCA GAGATGTTGC TAACGCGGTT CGCAGTTTTT CCCGCAATAT GTCAGCGGGA
CAGATACGTG CTGCCAATGG ATATATCAAC TTACGTGTGG AAAACCAAGC CTATCGTGGC
CATGAATTTG CACAAATTCC TGTTGTTACT TTAGAAGATG GCACCAAAGT CATGTTAGGA
GAGGTTGCTA CCATCAATGA TGGTTTCGAA GAAGGGTTAC AGTACTCTAA GTTTAATGGC
GAAAATTCAA TCACTATTTT TGTCGGTGCC TCAGAGAATC AAAGTATTAC TAAGATTGCC
GATATTATGA ATAACTATGT TGATGAGAAA GCATCGGTTT TACCTCAAGG TGTCAAGCTG
GAAACCTGGG TTGATTTAAC ATATTACCTC AATGGCCGTT TGAATATGAT GTTAGACAAC
ATGAAAAGTG GTGCGGTATT AGTCTTTTTG ATGTTGGCCC TCTTTTTGCG GGTACGCTTA
GCCTTCTGGG TAATGATGGG CTTGCCAGTA TGTTTCTTAG GTACTTTATT ATTTATGCCG
ATGGAGTTTA TTGGTGTCAC CATCAATGTT ATTAGCTTAT TTGCTTTTAT ATTGGTATTG
GGTATTGTTG TTGATGATGC CATTGTTATG GGGGAAAGTG CTCATGATGA AATAGAAGAG
CACGGTCATA CCACAGACAA TGTTATTCGT GGTGTTAAAC GTGTCGCTAT GCCAGCAACT
TTTGGTGTAC TAACTACTAT TGCTGTATTT TTACCTTTCC TCTTTGGTGA AGGGCCATCT
TCAGCCTTTG GCAAAGCCAT TGGCGGGGTG GTAGTTTTAT GTCTGATATT CTCACTAATC
GAATCCAAAC TTATTTTACC GGCGCATTTA GTTAAAATGA AAGTGAAAAA GTTTAACCCG
AGAAACCCTC TGGATAGACT TCGTGCCTGG ATTGATACTA AGTTAAAAAA CTTCATCGAA
AATGTTTATC GCCCCGCTTT AATAAAGTTC ATTGAATATC GATATGCTGT ACTGATGTTT
TTTATTAGTT TGATGTTGCT GAGCGCCGGT TTATTTGGTG GTGGTTTAGT GCGTTATGTT
GGTCAGCCTA AAATCCCTCA TGATTTTCCT CGCATCAATG TGGAAATGAA CATAGATGCT
TCAGAAAAAT CCACTTTAAA TACCTTACTA AATATTGAAA GTATTATTCA TAAAATAGAT
CAGGATATTG AAAAGCAGTA TGGAAATTCA ATGATTGCCG ATATGCAAGT TGAGTTACGT
AGCAGAACTA ATGGCCAAGT GATGGTTAAG CTAGTTATTC CAAAAGAAAG AGCTATCAAC
ACTTTTGAAC TTGCCGATTT ATGGCGTAAA GCAATTCCTG ATTACCCTGG TGTTAAGTCG
CTAACCATTA GTGATAATTT CTTTGGCGGT GGTCGTGATG ATGGTGATAT AGCCTTTAGA
TTGGAAAGTC AGGATGATGC TCAGCTAATG GCTGCAGCAC AAGAGCTGAA GCTTAAACTT
AATTCGCTTA AAGGGGTCGG TGATGTTAAT GACTCTCGTC AAACCAGTGC TAAAGAAGTG
CAGTTCTCAT TAAAACCCTT AGCCTATAGC TTAGGTTTAA CTCTGGAAGA TATTGCTTCG
CAAGTTAGTT ATAGTTTTTA TGGCTTAGAA GCGCAGCGTA TTTTACGAGA TAGCGAAGAA
GTTAAGGTTA TGGTGCGTTA TCCCCTTGAG CAGCGCAGCA GTGTTGGCCA TGTTGATGAT
GTTATGATCC AGGCGCCTAA TGGTGCAGAA TTGCCTTTAT CTGAGTTAGC TGAAATTAAT
TTGACCGATG GTGTTACTCG CATTCGTCGT GAAAATGGTA ATCGTACTAT TAATGTATGG
GCATCTGTTG ATGCTGAGCA GGTTGAACCT TTTGAAGTCG CTAAAGATGT TCGTGATAAT
TTTATTCCTG ACCTACTTAG AAAGTATCCG TCGGTAAAAA GTGAAGTATC CGGTCGAATT
CAGGAAGAAA TGGATGGTGC AGCAGAACAA ATGCGTGATC TAATGATTTC GATTATGATT
ATATTTTCGC TTTTGGCTAT ACCGTTAAAG TCATACTCTC AAGCTCTTAT GATCTTAACC
GTAATCCCTT TTGGCGTTAT TGGTGCGGTA TTTGGTCATA TGATCTTAGG CTTGGATTTA
AGTGTGTTAT CCATGTTTGG TATTGCCGCT GCGTCAGGTG TGGTAGTTAA TGACTCTTTA
GTCATGGTCG ACTTTGTTAA TAAGGCAAGA CAGCGTGGTG AGCGTTTAAA AGATGCAGTA
ATACATGCTG GAACCAAGCG TTTTCGCGCT ATCATGTTAA CCTCAATTAC TACTTTTATT
GGCTTAGTAC CTATCATTTT CTTTGAAACC AGTGCCCAGG CACAGATAGT GATTCCTATG
GCGGTATCAT TATCCTTTGG TGTGTTATTT GCCACAGTGG TTACTTTAGT ACTAATACCA
AGTTTGTATT TAATTATCGA GGACATAAAA AAGGTATTTT CTCGTAATAA AAATAAAAAA
CTTGTTGAAG GAGCTGTAAC GGCTAAAGAA CTAGCTTCAA ATTAA
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| Protein sequence | MSSSDLKTNE KNDSENLNRP HDDIDTNKGI IAWFARNTIA ANLLMVFILI GGGLTALTIN
KQMFPQLEFN WISYAAPYPG AAPQEVEEGI TIKIEEALKS VQGLKRVITY SNRNYSNGWF
EVELDYDPQV VLEEVKSAID AIPSFPEGME RIKVEREKFR QEVMYISLYG DLTNGELKEL
GRKIHNEIQQ LPGISISELY SGLAYEISVE VSKDKLREYG LSFRDVANAV RSFSRNMSAG
QIRAANGYIN LRVENQAYRG HEFAQIPVVT LEDGTKVMLG EVATINDGFE EGLQYSKFNG
ENSITIFVGA SENQSITKIA DIMNNYVDEK ASVLPQGVKL ETWVDLTYYL NGRLNMMLDN
MKSGAVLVFL MLALFLRVRL AFWVMMGLPV CFLGTLLFMP MEFIGVTINV ISLFAFILVL
GIVVDDAIVM GESAHDEIEE HGHTTDNVIR GVKRVAMPAT FGVLTTIAVF LPFLFGEGPS
SAFGKAIGGV VVLCLIFSLI ESKLILPAHL VKMKVKKFNP RNPLDRLRAW IDTKLKNFIE
NVYRPALIKF IEYRYAVLMF FISLMLLSAG LFGGGLVRYV GQPKIPHDFP RINVEMNIDA
SEKSTLNTLL NIESIIHKID QDIEKQYGNS MIADMQVELR SRTNGQVMVK LVIPKERAIN
TFELADLWRK AIPDYPGVKS LTISDNFFGG GRDDGDIAFR LESQDDAQLM AAAQELKLKL
NSLKGVGDVN DSRQTSAKEV QFSLKPLAYS LGLTLEDIAS QVSYSFYGLE AQRILRDSEE
VKVMVRYPLE QRSSVGHVDD VMIQAPNGAE LPLSELAEIN LTDGVTRIRR ENGNRTINVW
ASVDAEQVEP FEVAKDVRDN FIPDLLRKYP SVKSEVSGRI QEEMDGAAEQ MRDLMISIMI
IFSLLAIPLK SYSQALMILT VIPFGVIGAV FGHMILGLDL SVLSMFGIAA ASGVVVNDSL
VMVDFVNKAR QRGERLKDAV IHAGTKRFRA IMLTSITTFI GLVPIIFFET SAQAQIVIPM
AVSLSFGVLF ATVVTLVLIP SLYLIIEDIK KVFSRNKNKK LVEGAVTAKE LASN
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