| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4482 |
|---|
| Symbol | |
|---|
| ID | 3522383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4722932 |
|---|
| End bp | 4723825 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637286922 |
|---|
| Product | Bax domain-containing protein |
|---|
| Protein accession | YP_271130 |
|---|
| Protein GI | 71281911 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2992] Uncharacterized FlgJ-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAA CATCGGTCGC ATTGATACTT GTGCTAACAA GTATCACCAG CCTACTTACT
GATGCATATG ACGGAAAAAA TCAATTTGTC GAAGTCGAAA TTCGATCTTT AGATGGCTTA
ATGTCCTTAT TTAAAAAACA CCATTACACC AGTAACGATT GGAAAAATGG TGATAGAGAA
GTACCAAGGT TAACGTTCGA AGGCGTTAGT GAGCAATGGA AAGAAACGTC GAGTAAAATT
CCCGTCAAAC AAAAGAAGCA GGTGTTTTTT CGCTTAATGG CACCTTTAGT TTTAATGTCT
AATGAAAATA TTCTCGCAGA ACGCAACATT GTAAAGTCAG CGCCGTTGTC ATCGAAAACA
TTGCTTAAAA TAGCTAAGAA ATATCGTTTA GTTAACAATG AAAGCTTAAG TTTAACGAGC
AAACAACGTC AACAATTGTT GCAACAAGTC GATATTATGC CGCCATCTCT TGCATTGGCT
CAAGCTGCAG AGGAAAGTGG CTGGGCTACG TCACGCTTTA CCGAAGAAGG TAATGCTTTT
TTTGGTCAGT GGGATTTTTC TGGAAAAGGC ATGACACCTA AACAGCAACG TAAAGAGCTA
GGTAATTATG GTTTAGCCCG TTTTGATAGT CCATTAGATT CTGTTGAGGG TTATATGCTT
AACATTAATA TCACTGGGGC TTATAAAAAG CTGCGTGTAT TAAGGGCTCA GTTGCGCCAA
GAAAATAAAG CTATTACAGG GTTAGAATTA GCAGGAACGT TAGATAAGTA TTCTGAACGT
GGACAAGCCT ATATTGATGG TCTGCGATCG ATGATCCGTT ATAACAAATT AGAAGATGTA
GATGAAGCTT ATTTATCTGA CACGATATTG ATTAAGCTTA TAGCCCCCAA ATAA
|
|---|
| Protein sequence | MIKTSVALIL VLTSITSLLT DAYDGKNQFV EVEIRSLDGL MSLFKKHHYT SNDWKNGDRE
VPRLTFEGVS EQWKETSSKI PVKQKKQVFF RLMAPLVLMS NENILAERNI VKSAPLSSKT
LLKIAKKYRL VNNESLSLTS KQRQQLLQQV DIMPPSLALA QAAEESGWAT SRFTEEGNAF
FGQWDFSGKG MTPKQQRKEL GNYGLARFDS PLDSVEGYML NINITGAYKK LRVLRAQLRQ
ENKAITGLEL AGTLDKYSER GQAYIDGLRS MIRYNKLEDV DEAYLSDTIL IKLIAPK
|
|---|
| |