Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4469 |
Symbol | murF |
ID | 3520386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4707193 |
End bp | 4708734 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286909 |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_271117 |
Protein GI | 71279923 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACTA TTTCACTAAC TACTTTAGTT AAAGTTACTG ATGGCGAACT CATTGTTCCA GCAATACAAA CAGCGTTAAG CCTTGATGAA TTAGTTATCG ACGATTTAGT TATTGATAGT CGTGCTATCA AAGAGCATTC TGACAAGTGT TCTGCTTTCC TTGCTCTTAA AGGACCTAAT TTTGATGGCC ACCGCTTTGC AGAGCAAGTT ATCAAACAAG GCTGTCAATT ACTCATCGTT GATCATCATT TGAGCGCAGT GACGGATACC GCGCAATTAA TCGTGAGTGA TACGCGAATA GCGCTAGGTA AAATTGCTGC TTTTGTTAAA AAAGAAGTCG CACCAAAAAC GGTGGGCATT ACCGGTAGTA GTGGAAAAAC AACGGTTAAA GAAATGGTTG CGGCCATATT ATCTCGTTTA GGTAAGGTCT TAGCAACGAA TGGTAATTTC AATAATGATA TTGGCGTACC ATTAACATTA CTTCGCTTAG ATAACAGCCA TGATTTTGCT GTTATTGAAA TGGGTGCTAA TCATATGGGT GAAATTGCTT ATACCACAGC GTTAACTCAG CCAGATGTTG CCGTGATTAA TAATATTGCT GCAGCGCACC TAGAGGGTTT TGGCGATTTA TGTGGCGTAG CTCGGGCAAA AGGTGAAATA TTTTCAGGGC TTGGTGAAAA TGGTGTTGCT CTCTATAACA AAGACACCAA GTACACCAGC AAATGGCAAT GGCGTTTAAC GGATAAAACG GTTCGTACCT TTTCTTGTGT TAATAAAGCC AATTGTTATA GCGAAAAGGT CAGCTTAGAC AAAAATGGCT GTGCCAGCTT TACCTTGCAA AGCGAGCAAG GTTCTTGTGT TATGACTTTA ACGGTACCTG GTAAACATAA TGTTTGTAAT GCGGTTGCTG CGGCTGCTAT TGCGTTAGAA TTTGGTGCCA GTCTTGAGGA CATTCAGTTA GGTTTAGCCC AAATGCAGCC AGTAAAAGGT CGACTAAATT TACATCAATT AGAAAATAAA AAAACGGGCT GCAACGTAAA ACTGATTGAT GATAGCTATA ACGCAAATCT TGAATCAGCA AAAGCGGCAG CGCAATTATT ATCAAGCTAT CCAGGTAAGC AATTACTTAT TCTAGGTGAC ATGGGCGAGC TAGGCAGTGA AGCGCGTAGT TATCATCAAG AAGTTGGTGG GTTTGCTAAG CACTTACAGT TAAATACTCT CTTGTCGTTA GGTGTGTTAA GTCAAAGTGC CAGTGATGCT TTTGCCAAAG ACAATCACAA AAATGATCAA AGTCAGCATT TCAATCAAAG AGCTGATTTG ATGACCCATT TATTTACCAT GTTGAGTCAA CAATTGTCTG TTGGTCAGCA AGATATTGCT ATTTTAGTTA AAGGCTCTCG AAGTGCGCAT ATGGAGCATG TAGTGACAGA AATTATTGAT TGGTTTGAAC AAATGAATGC CGAGCAAGCT ATGAATCAAG AACAAAGTAC TAGCCAAATA AATGTAGCTA GTGATAATCA AAGTAAAGAA GGTATGGCTT AA
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Protein sequence | MITISLTTLV KVTDGELIVP AIQTALSLDE LVIDDLVIDS RAIKEHSDKC SAFLALKGPN FDGHRFAEQV IKQGCQLLIV DHHLSAVTDT AQLIVSDTRI ALGKIAAFVK KEVAPKTVGI TGSSGKTTVK EMVAAILSRL GKVLATNGNF NNDIGVPLTL LRLDNSHDFA VIEMGANHMG EIAYTTALTQ PDVAVINNIA AAHLEGFGDL CGVARAKGEI FSGLGENGVA LYNKDTKYTS KWQWRLTDKT VRTFSCVNKA NCYSEKVSLD KNGCASFTLQ SEQGSCVMTL TVPGKHNVCN AVAAAAIALE FGASLEDIQL GLAQMQPVKG RLNLHQLENK KTGCNVKLID DSYNANLESA KAAAQLLSSY PGKQLLILGD MGELGSEARS YHQEVGGFAK HLQLNTLLSL GVLSQSASDA FAKDNHKNDQ SQHFNQRADL MTHLFTMLSQ QLSVGQQDIA ILVKGSRSAH MEHVVTEIID WFEQMNAEQA MNQEQSTSQI NVASDNQSKE GMA
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