Gene CPS_4469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4469 
SymbolmurF 
ID3520386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4707193 
End bp4708734 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content39% 
IMG OID637286909 
ProductUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 
Protein accessionYP_271117 
Protein GI71279923 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACTA TTTCACTAAC TACTTTAGTT AAAGTTACTG ATGGCGAACT CATTGTTCCA 
GCAATACAAA CAGCGTTAAG CCTTGATGAA TTAGTTATCG ACGATTTAGT TATTGATAGT
CGTGCTATCA AAGAGCATTC TGACAAGTGT TCTGCTTTCC TTGCTCTTAA AGGACCTAAT
TTTGATGGCC ACCGCTTTGC AGAGCAAGTT ATCAAACAAG GCTGTCAATT ACTCATCGTT
GATCATCATT TGAGCGCAGT GACGGATACC GCGCAATTAA TCGTGAGTGA TACGCGAATA
GCGCTAGGTA AAATTGCTGC TTTTGTTAAA AAAGAAGTCG CACCAAAAAC GGTGGGCATT
ACCGGTAGTA GTGGAAAAAC AACGGTTAAA GAAATGGTTG CGGCCATATT ATCTCGTTTA
GGTAAGGTCT TAGCAACGAA TGGTAATTTC AATAATGATA TTGGCGTACC ATTAACATTA
CTTCGCTTAG ATAACAGCCA TGATTTTGCT GTTATTGAAA TGGGTGCTAA TCATATGGGT
GAAATTGCTT ATACCACAGC GTTAACTCAG CCAGATGTTG CCGTGATTAA TAATATTGCT
GCAGCGCACC TAGAGGGTTT TGGCGATTTA TGTGGCGTAG CTCGGGCAAA AGGTGAAATA
TTTTCAGGGC TTGGTGAAAA TGGTGTTGCT CTCTATAACA AAGACACCAA GTACACCAGC
AAATGGCAAT GGCGTTTAAC GGATAAAACG GTTCGTACCT TTTCTTGTGT TAATAAAGCC
AATTGTTATA GCGAAAAGGT CAGCTTAGAC AAAAATGGCT GTGCCAGCTT TACCTTGCAA
AGCGAGCAAG GTTCTTGTGT TATGACTTTA ACGGTACCTG GTAAACATAA TGTTTGTAAT
GCGGTTGCTG CGGCTGCTAT TGCGTTAGAA TTTGGTGCCA GTCTTGAGGA CATTCAGTTA
GGTTTAGCCC AAATGCAGCC AGTAAAAGGT CGACTAAATT TACATCAATT AGAAAATAAA
AAAACGGGCT GCAACGTAAA ACTGATTGAT GATAGCTATA ACGCAAATCT TGAATCAGCA
AAAGCGGCAG CGCAATTATT ATCAAGCTAT CCAGGTAAGC AATTACTTAT TCTAGGTGAC
ATGGGCGAGC TAGGCAGTGA AGCGCGTAGT TATCATCAAG AAGTTGGTGG GTTTGCTAAG
CACTTACAGT TAAATACTCT CTTGTCGTTA GGTGTGTTAA GTCAAAGTGC CAGTGATGCT
TTTGCCAAAG ACAATCACAA AAATGATCAA AGTCAGCATT TCAATCAAAG AGCTGATTTG
ATGACCCATT TATTTACCAT GTTGAGTCAA CAATTGTCTG TTGGTCAGCA AGATATTGCT
ATTTTAGTTA AAGGCTCTCG AAGTGCGCAT ATGGAGCATG TAGTGACAGA AATTATTGAT
TGGTTTGAAC AAATGAATGC CGAGCAAGCT ATGAATCAAG AACAAAGTAC TAGCCAAATA
AATGTAGCTA GTGATAATCA AAGTAAAGAA GGTATGGCTT AA
 
Protein sequence
MITISLTTLV KVTDGELIVP AIQTALSLDE LVIDDLVIDS RAIKEHSDKC SAFLALKGPN 
FDGHRFAEQV IKQGCQLLIV DHHLSAVTDT AQLIVSDTRI ALGKIAAFVK KEVAPKTVGI
TGSSGKTTVK EMVAAILSRL GKVLATNGNF NNDIGVPLTL LRLDNSHDFA VIEMGANHMG
EIAYTTALTQ PDVAVINNIA AAHLEGFGDL CGVARAKGEI FSGLGENGVA LYNKDTKYTS
KWQWRLTDKT VRTFSCVNKA NCYSEKVSLD KNGCASFTLQ SEQGSCVMTL TVPGKHNVCN
AVAAAAIALE FGASLEDIQL GLAQMQPVKG RLNLHQLENK KTGCNVKLID DSYNANLESA
KAAAQLLSSY PGKQLLILGD MGELGSEARS YHQEVGGFAK HLQLNTLLSL GVLSQSASDA
FAKDNHKNDQ SQHFNQRADL MTHLFTMLSQ QLSVGQQDIA ILVKGSRSAH MEHVVTEIID
WFEQMNAEQA MNQEQSTSQI NVASDNQSKE GMA