| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4467 |
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| Symbol | murD |
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| ID | 3518421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4704643 |
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| End bp | 4706058 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286907 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_271115 |
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| Protein GI | 71277817 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTGGT TAACAGCGTT TAAAGATAAA AATATTGTCG TGCTAGGAGC TGGAATGACA
GGTTTGTCAT GCCTACGTTT TTTGCACGCA CAAGATTTGT CATTTGCTGT TAATGATTCA
CGACCTATGC CTTTTGCAAA TAGGGATGAA CAAACTCAAT ACGAGAATGA TTATCCAAAG
GCAAAATTTG TTTTCGGTCA ATGGCAACAA AGTTTAATTT CTAGTGCTGA TATAATTATT
ACCAGTCCAG GTATTGATTT AGTCAGTGAA GGAATTACAG CACTTATCCC AGAAAACTGT
CTGGTTATAG GTGACGTTGA ATTATTTTGC CTAGTTAACA ATAGCCGCAT CTCCCCGATG
AAAATGTTGG CAGTCACTGG CTCAAATGGC AAGTCTACCG TAGTGTCACT GTTAGCTTCT
CTAGCAAAAG CTATCGGAGT TAATGCTGCA TTGGCAGGTA ACATCGGAGA GCCAATACTT
AATCTACTTC ATCGAGAAAA TGTCTATAAC TCTCAGCTTG CTAATCAACC AGACATTGTC
ATTGTCGAGC TTTCGAGTTT CCAACTAGAA ACGTTATCCA GTATGCATGC TATTGCTGCG
AGTGTGCTTA ATTTAAGTGA TGATCACCTT GACCGGCATA AGACCTTAGC GAATTACCAG
GCTATTAAAC AAAGTATTTA TCCACAAGCA AAAATTGCCG TGGTGAGTCG AGAAGATCAA
GCATCAAATA CTTTAGTTGC CGCTCAAGAA ATAATTTCTT TTGGTTTAAA TAAACCAGAG
CAAGACTGTT TTGGTCTGCA AGCTATTGAT AATAAAATGG TAATGATGTT TGGTGAACAA
GCTTTAATTT CAATTGATGA ATTACCTCTT GCCGGTATGC ATAATGCGCT CAATTATATG
GCAGCTTTAG CACTTGGTTA TAGCGCTGGT TGGTCATTAT CAGCTATGAC AGAAAACCTT
GCCGGATTTA TGGGTTTAGC TCACCGTTGC CAGCGCGTAG CGAGTGAAGA TTACATTCAA
TGGATTAATG ATTCTAAGGC GACAAATGTT GGTGCAACAC TCGCCGCTAT TACTGGTTTA
GTCCCGACGC TTACAGGCCA AAATAAGTTA ATTCTTATTG CTGGCGGTGA TGGCAAAGGT
GCTGATTTTT CAGCGCTAAC AACAATATTA AATTGTGATG TAAATCAGCT GATTACTTTA
GGTAAGGACG GCGCTGAGAT TGCTAGTTTA GTGAGTGATG CTATTCAAGT GGATACCCTC
AGGGAAGCAG TAGAGCAAGC TAAGCAGATA GCCAAACCAG GTGACATGGT CTTACTTTCA
CCAGCGTGCG CCAGTATTGA TATGTTCAAA AATTATCAAG TACGCGGCGA GCAATTCATT
GCAGCAGTAC AAGCTAAGGA GGACTCATGT CGTTAG
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| Protein sequence | MTWLTAFKDK NIVVLGAGMT GLSCLRFLHA QDLSFAVNDS RPMPFANRDE QTQYENDYPK
AKFVFGQWQQ SLISSADIII TSPGIDLVSE GITALIPENC LVIGDVELFC LVNNSRISPM
KMLAVTGSNG KSTVVSLLAS LAKAIGVNAA LAGNIGEPIL NLLHRENVYN SQLANQPDIV
IVELSSFQLE TLSSMHAIAA SVLNLSDDHL DRHKTLANYQ AIKQSIYPQA KIAVVSREDQ
ASNTLVAAQE IISFGLNKPE QDCFGLQAID NKMVMMFGEQ ALISIDELPL AGMHNALNYM
AALALGYSAG WSLSAMTENL AGFMGLAHRC QRVASEDYIQ WINDSKATNV GATLAAITGL
VPTLTGQNKL ILIAGGDGKG ADFSALTTIL NCDVNQLITL GKDGAEIASL VSDAIQVDTL
REAVEQAKQI AKPGDMVLLS PACASIDMFK NYQVRGEQFI AAVQAKEDSC R
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