| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4454 |
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| Symbol | secA |
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| ID | 3522474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4690796 |
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| End bp | 4693477 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286894 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_271102 |
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| Protein GI | 71282002 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGAA ATTTGTTAAC AAAAATGTTT GGTAGTCGAA ATGATAGATT ACTAAAACAA
ATGAGCAAAG AAGTAACTAA AATAAATGCA CTTGAACCGG TATTAGAAGC GTTAAGTGAT
GAAGAATTAA AAGCCAAAAC CACAGAGTTT AAGGAACGAT TTACTCAAGG CGAAACAGTA
GAACAATTGT TAGTTGAAGC TTTTGCTGTC GTTAGAGAAG CCAGTAAACG AGTGTTTGGC
ATGCGTCATT TCGATGTGCA AATGATTGGT GGCATGGTAC TAAATGAAGG CAAGATTGCC
GAAATGCGTA CTGGTGAAGG TAAAACATTA ACGGCAACTT TGCCGTCATA CCTTAATGCG
TTAACCGATA AAGGTGTTCA CGTTATTACT GTCAATGATT ACTTAGCTAC TCGTGATGCA
GATTGGAGTC GTCCTTTATT TGAATTTCTT GGCTTAACTG TTGGCTGTAA TGTTGCCGGA
ATGACAACTC AAGATAAACA AGCTGCCTAT CAATCAGATA TCACCTACGG CACAAATAAT
GAATTTGGTT TTGATTATTT ACGTGACAAT ATGGTGTTCT CACCGCAAGA GCGCTCTCAA
AAACCACTAC ACTTTGCCAT TATAGATGAA GTAGATTCAA TCCTAATTGA TGAAGCTAGA
ACGCCACTGA TTATTTCAGG TCAAGCTGAA GATAGCTCTG CACTTTATAA GATAATTAAT
ACTTTAGTAC CGACGCTTGA ACAGCAAGAA GAAGAAGATA AAGAAGGTGA AGAAAGCACG
GGTGATTTCA CTATTGATGA AAAAGCCAAG CAAGTTTATT TAACAGAGCG TGGTCAAATT
CATATTGAAG AGATCATGGT TGAAAAAGAG TTACTCACTG CGGGTGATAC TTTATTTTCA
GCGGCCAATA TAACGTTATT ACACCATGTT ATGGCAGCAC TTCGTGCTCA TAAATTGTTT
CAAAAAGATG TCGATTATAT CGTAAAAGAT GATGAGATAG TTATTGTCGA TGAGCATACG
GGTCGAACAA TGGAAGGTCG ACGTTGGTCT GAAGGTCTCC ATCAGGCAGT AGAAGCCAAA
GAAGGCGTTA ATATTCAAAA TGAAAATCAG ACGCTAGCTT CTATCACCTT TCAAAATTAT
TTCAGAATTT ATGAAAAATT ATCTGGCATG ACCGGAACAG CAGATACAGA GGCTTTCGAA
TTCAATCATA TCTATGGTCT AGAGACTGTT ATTATTCCTA CTAACCAGCC AATGGTTCGT
AAAGATTTGT CTGATTTGAT TTACTTAACT ACAGAAGAAA AATTTGAAGC TATTTTAGCT
GATATACAAG ATTGCGTGAA ACGAGGGCAG CCTGTTCTTG TCGGCACTAT TGCGATTGAA
ACTTCTGAGT TCTTATCTGA TTTCTTGAAA AAAGCAAAAA TTAAGCACAA AGTACTTAAT
GCTAAATTTC ATCAGCAAGA AGCTGAAATT GTCGCTGATG CAGGTAAAGA AAATGCAGTA
ACAATAGCGA CTAATATGGC TGGCCGTGGT ACTGATATCG TTTTAGGTGG CAATTTAGAT
GCCACTATCG CTAAATTAAC TAACCCTAGC GAAGATGATA TCGCTAAAGC TAAAGCGCAG
TGGAAAATTG ACCATGAACG TGTACTTGAG TTGGGTGGTT TACATATAGT TGCTACAGAA
CGTCATGAGT CTAGACGAAT CGATAATCAA CTTCGTGGAC GCTCAGGTCG ACAAGGTGAT
GAAGGTTCAA CGCGTTTTTA CCTATCAATG GAAGATTCAT TGATGCGTAT ATTTGCCTCA
GAACGTATTT CAAATATGAT GCGTAAGTTA GGCATGGAAA AGGGTGAGGC TATTGAGCAC
CCTTGGGTTA CTCGTAGTAT TGAAAATGCA CAGCGTAAAG TTGAAGGTCG TAACTTTGAT
ATGCGTAAGC AATTATTAGA ATATGATGAT GTTGCTAATG ATCAACGTGG TGTTATCTAT
GAGCAACGTA ATGAGTTACT TGATAATGAA GAAATTGGTT CAGTTGTTGA AGCAATTCGC
AGTGATGTGA TTAATGGTGT AATCGATCAG CACATTCCGC GTCAATCATT AGACGAAATG
TGGGATATCG AAGGCCTTGA AGAACAATTA AAGGGTGAGT ATGCAACTGA ACTGACCATC
GCTAAATGGC TTGAAGATGA TAGTAAACTT CATGAAGAAA GCTTGCGCGA AAAGATCATT
ACTGAGTTTG AACAAGCTTA TAAAGATAAA GAAGAAGCTG TTGGCGTAGA TGTTTTACGT
CAGTTTGAAA AAGCAGTGAT GTTACAAAGC TTAGATTCAC ATTGGAAAGA GCATTTATCA
GCCATGGATC ACCTGCGTCA AGGTATCGGG TTACGAGCTC ACGCACAAAA GAATCCTAAA
CAAGAATTCA AGCGTGAATC ATTTGAGTTA TTTACTGAAA TGTTAGATAA CTTAAAGTAT
GACGTTGTAG GTATTTTATC TAAAGTACAA ATTCGTGCTG AGTCTGATGT TGAAGCGGTA
GAAGAGCAGC ATAGAAAGTC TGAAGAAGTA CCAATGGATT TCCAGCACCA ATCAGCATCA
AGCCCTAGTG AGCAAGCACA AACTCCTCGC GTGGGTCGTA ATGAACCTTG TCCATGTGGC
TCAGGTAAAA AGTATAAACA ATGTCATGGC AAGCTTGCCT AG
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| Protein sequence | MFGNLLTKMF GSRNDRLLKQ MSKEVTKINA LEPVLEALSD EELKAKTTEF KERFTQGETV
EQLLVEAFAV VREASKRVFG MRHFDVQMIG GMVLNEGKIA EMRTGEGKTL TATLPSYLNA
LTDKGVHVIT VNDYLATRDA DWSRPLFEFL GLTVGCNVAG MTTQDKQAAY QSDITYGTNN
EFGFDYLRDN MVFSPQERSQ KPLHFAIIDE VDSILIDEAR TPLIISGQAE DSSALYKIIN
TLVPTLEQQE EEDKEGEEST GDFTIDEKAK QVYLTERGQI HIEEIMVEKE LLTAGDTLFS
AANITLLHHV MAALRAHKLF QKDVDYIVKD DEIVIVDEHT GRTMEGRRWS EGLHQAVEAK
EGVNIQNENQ TLASITFQNY FRIYEKLSGM TGTADTEAFE FNHIYGLETV IIPTNQPMVR
KDLSDLIYLT TEEKFEAILA DIQDCVKRGQ PVLVGTIAIE TSEFLSDFLK KAKIKHKVLN
AKFHQQEAEI VADAGKENAV TIATNMAGRG TDIVLGGNLD ATIAKLTNPS EDDIAKAKAQ
WKIDHERVLE LGGLHIVATE RHESRRIDNQ LRGRSGRQGD EGSTRFYLSM EDSLMRIFAS
ERISNMMRKL GMEKGEAIEH PWVTRSIENA QRKVEGRNFD MRKQLLEYDD VANDQRGVIY
EQRNELLDNE EIGSVVEAIR SDVINGVIDQ HIPRQSLDEM WDIEGLEEQL KGEYATELTI
AKWLEDDSKL HEESLREKII TEFEQAYKDK EEAVGVDVLR QFEKAVMLQS LDSHWKEHLS
AMDHLRQGIG LRAHAQKNPK QEFKRESFEL FTEMLDNLKY DVVGILSKVQ IRAESDVEAV
EEQHRKSEEV PMDFQHQSAS SPSEQAQTPR VGRNEPCPCG SGKKYKQCHG KLA
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