Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4439 |
Symbol | petB |
ID | 3522901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4677556 |
End bp | 4678827 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286879 |
Product | ubiquinol-cytochrome c reductase, cytochrome b |
Protein accession | YP_271087 |
Protein GI | 71282427 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAG CTACTGATTT CATGGGTTGG ATAGACAAAC GTTTACCTGT AACAGATGCT TGGAATAAGC ATTTAGCGCA GTATCCAGCA CCAAAAAACT TCAACTTTTG GTACTTTTTT GGCTCTCTAG CCATGTTAGT ACTAGTAAAT CAAATTGTTA CCGGCATTTG GTTAACAATG AATTATGAAC CATCTGGTGA TGGAGCATTC GCCTCTGTTG AGTATATTAT GCGTGATGTC GACTTCGGTT GGTTATTACG TTACATGCAT TCTACGGGTG CATCTGCCTT TTTCGTCGTC GTATACATGC ACATGATGCG TGGTCTTATG TACGGTTCAT ACCAAAAGCC TCGTGAATTA CTATGGATCT TCGGTATGTT GATCTTCTTA GTATTAATGG CTGAAGCCTT TATGGGCTAC TTATTACCTT GGGGTAATAT GTCATATTGG GGTGCGCAAG TAATTATCTC CTTGTTTGGC GCTGTACCAA TTATTGGTGA TGATTTAACG CTTTGGATAC GTGGTGATTA CGTAATCTCG GGAGCTACCT TAAATCGTTT CTTCGCTTTA CACGTTATTG CTATGCCATT GGTACTGGTT GTTCTAGTGT TCTTGCATAT TCTTGCCTTG CATGAAGTAG GTTCAAATAA CCCTGAAGGT GTTGACATTA AAAAGCCTAA AGGCAGTGTT AAACCTGAAG AACTAAGTAA GTTTACTTTC CATAAACAAT ATAGTGAAAA ATACGATATT GTTGATGCTG TTCCTTTCCA CCCTTATTAC TCTGTTAAAG ATATTATGGG CGTTGCTGGT TTCTTATTCT TATTCTGTTG GGTGATGTTC TTTGCACCAG AGGGCGGTGG TTACTTTATG GAAGCACCAA ACTTTACCCC TGCGAACGGT TTGAAAACAC CTGAGCATAT TGCACCTGTA TGGTATTTTG GTCCTTTCTA CACAATATTA CGTGTTGTTC CTGATAAGTT ATTAGGTGCG GTTGCTATGT TTGGCGCAAT CGTGATGTTA TTTGCTTTAC CATGGTTCGA TCGTGGTGTT GTTAAGTCAG TTCGCTATCG TTCGAAGTTA CATTTAGTTA ACTTAATTCA ATTCGCTATC TGTTTTGTTG TTCTTGGTGC TTTAGGTACT ATGCCAGCAA CACCAACGGC TAATTTAATT GGTGTGATTG CTAGTTTTGG TTATTTTGGT TTCTTTATTG CTTTGTGGTT CTATAGCAAA AATGAAAATA CTAAACCAGT TCCAGAAAGG ATTGCAGACT AA
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Protein sequence | MKLATDFMGW IDKRLPVTDA WNKHLAQYPA PKNFNFWYFF GSLAMLVLVN QIVTGIWLTM NYEPSGDGAF ASVEYIMRDV DFGWLLRYMH STGASAFFVV VYMHMMRGLM YGSYQKPREL LWIFGMLIFL VLMAEAFMGY LLPWGNMSYW GAQVIISLFG AVPIIGDDLT LWIRGDYVIS GATLNRFFAL HVIAMPLVLV VLVFLHILAL HEVGSNNPEG VDIKKPKGSV KPEELSKFTF HKQYSEKYDI VDAVPFHPYY SVKDIMGVAG FLFLFCWVMF FAPEGGGYFM EAPNFTPANG LKTPEHIAPV WYFGPFYTIL RVVPDKLLGA VAMFGAIVML FALPWFDRGV VKSVRYRSKL HLVNLIQFAI CFVVLGALGT MPATPTANLI GVIASFGYFG FFIALWFYSK NENTKPVPER IAD
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