| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4420 |
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| Symbol | |
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| ID | 3519967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4659733 |
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| End bp | 4662021 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286861 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_271069 |
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| Protein GI | 71279508 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATTC AATGTTCAAA AAATCTTATC GCTATAGCCA TTGCTTCAGC ATTGTCGTTA
CCTGTTTCAG CAGCTGACAA ACAAGAAAGC GAAAGCACTA TGGAAGAAGT CACTGTTGTG
GCTAAAAAAT TATCTCATGC CAATCATGTG ATTGAGTCAT CAATGATAAA ACAGCAATCA
CCTGCGAGTA GCATACTCGC GATTATGGAC AACCTACCCG GTATTAGCAT CAATGAAGGC
GATGCTTTTG GTGGTGATGA TTGGTCAACA TCGATTACGA TGCGCGGCTT TACTATTGAT
GGTAATCAGC AGCAACTTGG AATGACAATT GACGGTATCC CAAATGGTGG TTCTAACTAT
GGCGGTGGCG CAAAAGCAAA TCGTTATTTA GACAGTGAAA ATATGCGTAC CATTGAAGTA
TCACAAGGAA CTTCTGACAT TTCATCTGCC TCATTAGAAG CATTGGGAGG TACTTTCAAT
TTTGTCAGTG CAGATCCTGC TTTTGAAGAA ACAACAACAT TGGCCTATAC CGATGGCGAT
CATGATGCAT CTCGTTATTT CATTCGTCAT GACACCGGAC GCATTTTTGA TAATACCTAC
GCTTACGCGA GCTATTCATC CACTTCCACT AGCCGCTGGG TTGGCGAAGG TTCAAACGGA
GGTATGCAAA GAGAGCACGC TGAGGTTAAG TTCATTACTG AGCTAGGTAA CTTAAGTATT
ACCGGCCGTT TATCTTATGA CGATGCCGAT GAAGATAATT ACAATTCGGT TAGTTTAGAG
CAGTTCAATC AAACACCTGA CTGGGATCAG TTAACATGGA ACTGGACCGG TACTCCCCAT
CTTGATCAAA TGTTTGCCGA GGGTTGGTCG ACCTTACGTG AAAATACTTT AGGTTATGTG
AAATTTGATT ATCAACTGTC AGACAACTTC TCTTTTCAAA TTACCCCCTA CTTTCATAAA
AATAAAGGTC GAGGTGATTG GATCCCTCCT TATTTAGTGT CTGCGGTTGA TGATGAAGGT
AATCCCGTCA ATCAAGGTGG TTCAATAGGC TCTACTTATG GCTTTACCGA TCAAAATGGT
ACGCCATTAG CCCCTGCTGC GGGTTGTGAG CAAAGTTTTA CTTGGCCATG GGATTCTGGC
CCAGGTTTAC ACCCTGCCTG TTATAGTGAT AGCGCTGTGC CAGTCATGTC ATATCGTCAT
ACTCATTATG AAAAAGATCG TGTAGGTTTA ACTGCAAACG CACAATGGTC TATTGCCATG
AACGATATTA AATTTGGTTT ATGGGCAGAA TCAAATGAGC GTAATGAATC GAGAGATTGG
CATAAAGTGA TTGATGCACG TGTTTATCAT CACTTTGATG CAACACCTTA TTGGACACAA
TATAGTAATG AATTTCAAAC CGACACTTTA AAGTTCTATC TACAGGACAC ACTAGATTTT
GGCGATCTCT CATTGAATAT CGGCGCCCAA AAATACTTAG TAGATATTGA AAAAACGGAT
GGCTTTACCA ACCAACAAAC GGGCAAAGTT AATAGTGACT CAGATGTACT CTTTAGTACT
GGAGCCATTT ACCAAATAAA CAGTAATATA GAATTATTTG CCGGTTACAG TGAGAACTTT
TCAGCCATTA AAGATGGTGT GTTAGAAAGG GAAGCTTCGA CTCTTGAAAA CATCGAACCA
GAAACAGCTG AGAATATTGA TTTAGGCCTG CGCTACAACA CTGAAGATAT TAGCTTTTCG
GCCACTTACT ACACCATTGA TTTTGAGAAT AGAATTACCT TCATAGCCCC TGGAAGTGAT
TCTGATGGTA TTGATTACAC CATTGGTACT AATGGCTCTT ACCTCAATGT TGGTGGTATT
GAGTCCGATG GTTTTGAACT CAGTGTAAAC TACCGCTTAA ATGATCAGTG GAGTTTATAT
TCATCTTATA CCAATAATGA TTCACGTTAT GTCGGTGATG CCCCAGGTTT TACCGCCGGT
GATAAAGTCA TCGATTCCGT GGATGATATG TTTGTCTTAT CAAGTGATTA CACTAAAGGT
GATTTCCGCC TTGGTGCATC GGGTAAATAT ACTGGAGAAC GTGGTGATGC GCCTTCTTAC
ACTACATTTG ATTTCAATGC CGGTTACTTT GTTCCTTTTG ACGGTCAAGC AATTAGCTCA
ATTGATATAG CTTTCGTTGT TACCAACATT ACCGATGAAA GTTATTTATC AACGGGAACA
GGCAATGGCA CTACCTTCTT TATTGGTGCA CCTCGAACGG CCTCAATGAC CTTTACTGCC
AGCTTTTAA
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| Protein sequence | MTIQCSKNLI AIAIASALSL PVSAADKQES ESTMEEVTVV AKKLSHANHV IESSMIKQQS
PASSILAIMD NLPGISINEG DAFGGDDWST SITMRGFTID GNQQQLGMTI DGIPNGGSNY
GGGAKANRYL DSENMRTIEV SQGTSDISSA SLEALGGTFN FVSADPAFEE TTTLAYTDGD
HDASRYFIRH DTGRIFDNTY AYASYSSTST SRWVGEGSNG GMQREHAEVK FITELGNLSI
TGRLSYDDAD EDNYNSVSLE QFNQTPDWDQ LTWNWTGTPH LDQMFAEGWS TLRENTLGYV
KFDYQLSDNF SFQITPYFHK NKGRGDWIPP YLVSAVDDEG NPVNQGGSIG STYGFTDQNG
TPLAPAAGCE QSFTWPWDSG PGLHPACYSD SAVPVMSYRH THYEKDRVGL TANAQWSIAM
NDIKFGLWAE SNERNESRDW HKVIDARVYH HFDATPYWTQ YSNEFQTDTL KFYLQDTLDF
GDLSLNIGAQ KYLVDIEKTD GFTNQQTGKV NSDSDVLFST GAIYQINSNI ELFAGYSENF
SAIKDGVLER EASTLENIEP ETAENIDLGL RYNTEDISFS ATYYTIDFEN RITFIAPGSD
SDGIDYTIGT NGSYLNVGGI ESDGFELSVN YRLNDQWSLY SSYTNNDSRY VGDAPGFTAG
DKVIDSVDDM FVLSSDYTKG DFRLGASGKY TGERGDAPSY TTFDFNAGYF VPFDGQAISS
IDIAFVVTNI TDESYLSTGT GNGTTFFIGA PRTASMTFTA SF
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