| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4418 |
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| Symbol | |
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| ID | 3519684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4656851 |
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| End bp | 4658203 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286859 |
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| Product | sigma-54 dependent DNA-binding response regulator |
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| Protein accession | YP_271067 |
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| Protein GI | 71278122 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACG CCACCATTTT AATTGCTGAT GATGATGAAG ACATTCGCTT AGCATTAAAC
TTATTACTTA GTGCACAGGG CTATCAGATT ATTGAAGCGG CTAACGCTAA AGAAATTATC
ATAGAAAGTA ACCGACAACA GCCAGATTTA GTATTGTTGG ATATGAACTT TTCTAGAGAT
ACCACTAGCG GTCAAGAAGG TTTAGCCATT TTAGAACAGT TACAGCCATT AAATATCCCA
GTGATTTTAA TGACAGCGTG GGGTTCAATT GAATTAGCGG TAGAAGGCTT ACAAAAGGGC
GCCAATGATT TTATAGAAAA ACCATGGAAC AAGCTTAAGC TACTAAACAG TATTAAACAG
CAATTAAGCT TTTCTCGGGC AAAAGAACAA AACCAAGGTT ATCGACAATT ACTTGCCGGC
GATAATAAAA AGGCTTGGGT TTGTCTATCA GAAAGTATGC AGGCTATTGA AACGCTAGTC
GCGCAAATAG CTCCAACAGA TGCCAACATC TTAATTTTAG GTGAAAATGG CACAGGTAAA
TCATTGCTTG CTGAGCGAAT TCATCAGTTA TCATCACGCC AGCAAGCTCC ACTTATCGCG
GTTAATATGG CGGCAATTCC TGATAATTTA TTTGAAAGTG AACTCTTTGG TCATCAAAAA
GGCGCCTTTA CTGACGCTAA ACAAAATCGT GTTGGCCGAT TTCAACTCGC TGATAAAGGG
ACTTTATTTT TTGATGAGAT AGGATCTTTA CCCCTAACAC TTCAGCCTAA ATTATTACGA
GTGTTAGAAA CGGGTCACTA TGAGATTTTA GGTTCGAGCC AAACACAAGT TGCTGATGTG
CGTTTAATTA GTGCAACCAA TGCCAACCTC AATCAACTGA TAAGTGAACA GGCGTTTCGC
CAAGATTTAT TATACCGTTT AAATACAATT GTGATTACTA TTCCACCCTT GCGTGAACGA
CTCGAAGATA TTCCAGGCTT GGCTAATTGC TTTATCACTA AATTCAGTGA GAAGTACCGG
AAACAAGCAT TAAACATCAG TCCATGTGCG CTCAGTAAAT TAAAACAACA CAATTGGCCG
GGCAACATAC GTGAATTTAG TCATGTGATT GAACGTGCAG TTTTACTCAC CAGCGGCGGA
GAAATAACAG CACAGCAATT ATTACTAGAG AACGCCGATA GCACTAATGA TACGGTACTG
TTACAACCAC TTGAACAAGC AGAGAAACAG TTGATTGAAA AAGCGATGAC AGTCACCGGT
GGGCAAGTGA TAGAAGCAGC AAAATTACTC GATATATCTC GTAATGCACT TTATCGACGT
TTAGAAAAGT TTGCCATTCA TCATGTCGAA TAA
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| Protein sequence | MTNATILIAD DDEDIRLALN LLLSAQGYQI IEAANAKEII IESNRQQPDL VLLDMNFSRD
TTSGQEGLAI LEQLQPLNIP VILMTAWGSI ELAVEGLQKG ANDFIEKPWN KLKLLNSIKQ
QLSFSRAKEQ NQGYRQLLAG DNKKAWVCLS ESMQAIETLV AQIAPTDANI LILGENGTGK
SLLAERIHQL SSRQQAPLIA VNMAAIPDNL FESELFGHQK GAFTDAKQNR VGRFQLADKG
TLFFDEIGSL PLTLQPKLLR VLETGHYEIL GSSQTQVADV RLISATNANL NQLISEQAFR
QDLLYRLNTI VITIPPLRER LEDIPGLANC FITKFSEKYR KQALNISPCA LSKLKQHNWP
GNIREFSHVI ERAVLLTSGG EITAQQLLLE NADSTNDTVL LQPLEQAEKQ LIEKAMTVTG
GQVIEAAKLL DISRNALYRR LEKFAIHHVE
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