| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4413 |
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| Symbol | |
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| ID | 3520669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4650482 |
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| End bp | 4651204 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286854 |
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| Product | putative ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_271062 |
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| Protein GI | 71280205 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTA ACACGGCACG TTTAGATCGC TTGATTAGTG ATTCACGCCA AATCAATCGT
AAAAAAGTAA GGTTGATTTT AGCGCAAAAA AGGGTTTATG TTGATGGTGT GTTAGCGACT
GATATTGCTC AATTAGTTGA CCAGTTTTCA CATGTCGTTA TGGATAATGA AGTACTACAG
GCTAATCAAA CACACTATAT TATGCTGAAT AAACCAATTG GTGTGGTTTG TGCGACCAAG
GATAAAAAAC ATAAGACTGT GATTGATTTA CTTGCTGAAC AATTTGATCA AGATGTTTTG
GATAGTTTAC ATATCGTCGG GCGACTCGAT CTAAATACGT CAGGCCTGGT GTTATTAACC
AATGACAGTC GTTGGTCTGA GCGGCTAACG TCACCGGAAC ATAAAGTCTC TAAAGGTTAT
CAAGTGACAC TAGAAAATGC GTTAACGACA GACTATATAG ATGCTTTTGC AAAAGGGATG
TATTTTCCTT ATGAGAACAT AACGACAAAA CCAGCAATTT TGCATATTGT TTCTCTCTTT
GAAGCACAAG TTAGCTTAAC TGAGGGGCGT TATCATCAAA TAAAGCGTAT GTTTGGCCGT
TTTCGTAACC CTGTTATTGC ATTGCACCGT TACTCAATAG GAAGCTTACG CTTAGATGAA
TCACTCAAGG ACGGAGAAAG TAGAGTTTTA AATGTATCAG AGGTGACTAG CATAAGTAGC
TGA
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| Protein sequence | MAINTARLDR LISDSRQINR KKVRLILAQK RVYVDGVLAT DIAQLVDQFS HVVMDNEVLQ
ANQTHYIMLN KPIGVVCATK DKKHKTVIDL LAEQFDQDVL DSLHIVGRLD LNTSGLVLLT
NDSRWSERLT SPEHKVSKGY QVTLENALTT DYIDAFAKGM YFPYENITTK PAILHIVSLF
EAQVSLTEGR YHQIKRMFGR FRNPVIALHR YSIGSLRLDE SLKDGESRVL NVSEVTSISS
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