Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4410 |
Symbol | putA |
ID | 3522073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4643263 |
End bp | 4647090 |
Gene Length | 3828 bp |
Protein Length | 1275 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286851 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_271059 |
Protein GI | 71281601 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATTTA CTGGTTCATT GATTACTGAT TGTCCAATAA GACAAAAAAT TCGTGAGTTT TATCGAATTG ACGAAAATGT TGCCGTTGAT CATATTTTAC CTGCTGCAGA AGTAAATGTT AGCGCAAGAA GCCGTGCGTG GGAACGCGCA CGTAAAATGG TTTTAAAAAT TCGTCAAGAC CAAGAAGGTA ATGGTGCAAT TGATTCGCTA CTCAATGAAT ACTCACTTTC TTCAGAGGAA GGCGTGGTAT TAATGTGTTT GGCCGAAGCG TTATTACGTG TACCAGATAA ACATACTCAA GATGAGCTTA TTCGCGATAA AATTTCTCAA GGTCAGTGGA GTTCCCATTT AGGTGCCAGT GACTCATTAT TTGTTAATGC TTCATCATGG GGTTTATTGC TTACAGGCTC TATGGTTAAT TACGCTGATA AGCGTAAAAA AGAACAATTT GGTTTACTAA AGAAAACTGT TGGTCGTTTA GGTGAGCCTG TTATTCGTAA ATCAATGAAC TATGCCATGA AAGTAATGGG TAAACAGTTT GTTATGGGCG AAACCATTAA AGCTGCTACC GAACGTGCAG CGACGAAAGA ACAGCAAGGT TATGTTTATT CATACGATAT GCTTGGTGAA GGTGCCCGTA CTATGGCTGA TGCCAATATG TACCTAAAAG CCTATCAAGA TGCTATTAAT GCTATTGGTG AAGTTGCTGT TGCTTCAGGT AAGAACGATC CGCGTAAAGT ACCTGGCATT TCAATTAAAC TTTCTGCTAT TCATCCTCGT TATGAGTTTT CTCATAAAGA ACGGGTAATG ACTGAAATAG TGCCTAAGTT AAAGGCATTA TGTTTACAAG CTAAGCAATA CAATATTGGT TTAACGGTTG ATGCGGAAGA ATCAGAGCGT TTAGATATCT CATTGGATAT CATTGAAGCG GTATTTTCTG ATAGTGAGCT TGGTGATTGG CAAGGCTTTG GTATAGCACT GCAAGCTTAC CAAAAACGTG CTATTCATGT TGTTGATTGG TTGCGTGACT TAACGTTGCG TACTGAACGA AAAATGATGG TGCGTCTTGT TAAAGGTGCT TATTGGGATA CTGAAATTAA GAATGCTCAA AAAGATGGCT TGAATCATTT TCCTGTGTTT ACCCGTAAGT CATCTACCGA TGTTTCTTAC CATGCTTGTG CCAATAAATT ATTAGAATAT CGCGATACTA TCTATCCACA ATTTGCCACG CATAATGCTT ATACTGCAGC AACCATAGTT GAATTAGCTG GCGATGATAA AGCTGGTTTT GAGTTCCAAT GTTTACATGG CATGGGGGAC TCTTTGTACG ACCAAATTGT TAAAGAAGAA AGTATTCAAT GTCGAATCTA TGCGCCAGTA GGTCATCATG AAGACTTACT GGCTTATTTG GTACGTCGTT TATTAGAAAA TGGTGCTAAC TCATCGTTTG TTAATGCTAT TGTTGATGAA GATCAACCAG TTGAATCATT ATTGGAAGAT CCAGTAGAAA AAACTCAACG CCTTAAAGCT AAATACAATA ACCAAATAAT TATGCCTATT GACCTCTATC GAGGTGAAGG TGAGAAAGGC CGAGATAATT CAAAAGGTCT AGATCTAACG GATATTAATG AAATCATTCC GCTAAAAGCC GCTTTAGATA ATTGGTTTGT TGACCATTTA TTGAATAAAA ATGAAGTGCC TGATGGCGCC AATGCCGTAA TGAACCCGGC GAACCGTAGT GAAATTATCG GCTTCCATCA ACATGCAAGC CATGGTGATA TGTTACTGAT GATTGATAAG GCCGAAACAG CCTTTAGCAC TTGGTCAAAA ACGCCTGCAG TAGATCGCGC CGCCTTGCTT TGTCGCATTG GTGATATTTT AGAGCGCCAT ATTGATGAGC TCATTGCAAT GTGTATCAAA GAAGCGGGTA AGGTCGCGCA AGATGGCATT GATGAAGTGC GCGAAGCTGT TGATTTTTGT CGTTACTACG CCGCTCGCGC TATTGAGTTA AGCAGTGATG AAAGATTAGA AGCACGTGGT GTAGTGTTAT GTATCAGTCC GTGGAACTTT CCTTTGGCTA TTTTCTTAGG CCAAGTTGCT GCTGCAATTG CCACGGGTAA TACTGTTTTA GCAAAACCCG CGGAACAAAC AGGTTTAATT GCGCTTCGTG CTATTGAATT GATGAAGTCA GTTGGTTTGC CTGAAAACGT AGTACAGGCT GTTATTGCGC GCGGTAGTGC CGTAGGTAAC ACTATTATTC CAGATAGCCG TATTCAAACA GTCATGTTTA CTGGCTCTAC AGAAACTGGC ACACGTATTT CACAAACGTT ATCAGACCGT GGTGGTGATC AAGTACCGCT AATTGCTGAA ACGGGTGGTC AAAATTGCAT GATTGTTGAC TCAACGGCAT TACCTGAACA AGTTGTTGAT GATGTTATCT CATCAGGTTT CCAGAGTGCA GGTCAACGTT GTTCAGCGTT ACGCGTACTC TTTTTACAGG AAGATATTGC AGATAATGTT ATTACCATGC TTCAAGGTGC ATTGGCGGAG TTACATATTG GCAATCCTGC AAAATTAAGT ACTGATATTG GCCCAGTTAT TGACCAAAAA GCCCTAGATG CGCTAAATGC TCACGCCGAA TATATGAAAT CACATGGCAA GTTACTTTAC CAATGTGAGT TCTCTGAAGA TGTTGTAGAT GAAGATGGTC ACTTTTTCTT TGCACCACGC TTGTATGAAA TTGATGATAT TAGCGTGTTA AAGCAAGAAG TCTTTGGTCC TTGTGTTCAT ATTGTTCGCT TTAAAGGTAA TGAAATAGAA AGTGTTGTGG ATAAAATCAA TGGCACTGGT TTTGGCTTAA CTATGGGTAT TCATACGCGT ATTGAGCATA GAGCTATTAA TTTAGCCAAA TTATCACGTG CGGGTAATAT TTATATAAAC CGTAACATGA TTGGCGCGAT TGTTGGTGTA CAACCATTTG GTGGTCGAGG CCTTTCTGGT ACAGGCCCTA AAGCGGGTGG CCCAAATTAT TTAACGCGTT TAGTTAAAGA AAAAGCTACA CCAGATGAGC GGGATTTTAA CTTTTCAGCA AATAAAACGA TTACCTTATC AGGTGATGCT GCTGAGAATC ATCAAGCAAA TCATTTGATG GATAAAGCGA ATTGGGCGGA GAAAGAGTGG CGTTCAACAG AACTAAATAC CCGAATTTCT TGTGTTCGCC AATTATTGGC TAAAATAGCG CACGTTGAAA TTGTCGATGA TCTAGCTGAA GATTTAAACC ATACCCTAGT CTTGGCGCGT TCACAGCTTA TTGATATTGA AAAGCGTTTG AAAAAACCAC AACAATTACC AGGGCCAACA GGTGAATCAA ATATTATTTA TTTGGAAAAC CGAGGCAATA TTATTTGTTA TGCGGATGAA AATGTTAGTT TTCACTTTTG GGTGCAATCT ATTGTTACCT CGCTTGCTAC AGGCAATACC GTTATTGCTG TTGTTTCTGA TCTGTTTTAT CAAGAAGCAT TGGAATTTAG AGACAAATTT GTTGCCACAG GCGCTGGTAA AGATGTTTTT CAGGTAGCTA AACAATGTCA TTTAGAAGCT ATGCTGGCAC ACCCCGCTTT GTCTGGTGTT GTGGTCGATA GTGGTTGTGA AATCAAGCAT TATATTAGTG AAAAATTAGC ATTACGTCAT GGGGCTATTT TACCGGTAAT AACCTCTGAA TATTTTGATA CTATGATTCA ACGTTTGGTT ACAGAAAAAA CGATTAGTAT TGATACTACG GCTTCAGGGG GAAATACCTC ACTGATGACC CTGGTTGAAG AAGACTAA
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Protein sequence | MLFTGSLITD CPIRQKIREF YRIDENVAVD HILPAAEVNV SARSRAWERA RKMVLKIRQD QEGNGAIDSL LNEYSLSSEE GVVLMCLAEA LLRVPDKHTQ DELIRDKISQ GQWSSHLGAS DSLFVNASSW GLLLTGSMVN YADKRKKEQF GLLKKTVGRL GEPVIRKSMN YAMKVMGKQF VMGETIKAAT ERAATKEQQG YVYSYDMLGE GARTMADANM YLKAYQDAIN AIGEVAVASG KNDPRKVPGI SIKLSAIHPR YEFSHKERVM TEIVPKLKAL CLQAKQYNIG LTVDAEESER LDISLDIIEA VFSDSELGDW QGFGIALQAY QKRAIHVVDW LRDLTLRTER KMMVRLVKGA YWDTEIKNAQ KDGLNHFPVF TRKSSTDVSY HACANKLLEY RDTIYPQFAT HNAYTAATIV ELAGDDKAGF EFQCLHGMGD SLYDQIVKEE SIQCRIYAPV GHHEDLLAYL VRRLLENGAN SSFVNAIVDE DQPVESLLED PVEKTQRLKA KYNNQIIMPI DLYRGEGEKG RDNSKGLDLT DINEIIPLKA ALDNWFVDHL LNKNEVPDGA NAVMNPANRS EIIGFHQHAS HGDMLLMIDK AETAFSTWSK TPAVDRAALL CRIGDILERH IDELIAMCIK EAGKVAQDGI DEVREAVDFC RYYAARAIEL SSDERLEARG VVLCISPWNF PLAIFLGQVA AAIATGNTVL AKPAEQTGLI ALRAIELMKS VGLPENVVQA VIARGSAVGN TIIPDSRIQT VMFTGSTETG TRISQTLSDR GGDQVPLIAE TGGQNCMIVD STALPEQVVD DVISSGFQSA GQRCSALRVL FLQEDIADNV ITMLQGALAE LHIGNPAKLS TDIGPVIDQK ALDALNAHAE YMKSHGKLLY QCEFSEDVVD EDGHFFFAPR LYEIDDISVL KQEVFGPCVH IVRFKGNEIE SVVDKINGTG FGLTMGIHTR IEHRAINLAK LSRAGNIYIN RNMIGAIVGV QPFGGRGLSG TGPKAGGPNY LTRLVKEKAT PDERDFNFSA NKTITLSGDA AENHQANHLM DKANWAEKEW RSTELNTRIS CVRQLLAKIA HVEIVDDLAE DLNHTLVLAR SQLIDIEKRL KKPQQLPGPT GESNIIYLEN RGNIICYADE NVSFHFWVQS IVTSLATGNT VIAVVSDLFY QEALEFRDKF VATGAGKDVF QVAKQCHLEA MLAHPALSGV VVDSGCEIKH YISEKLALRH GAILPVITSE YFDTMIQRLV TEKTISIDTT ASGGNTSLMT LVEED
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