Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4398 |
Symbol | |
ID | 3520821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4633870 |
End bp | 4634721 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637286839 |
Product | hypothetical protein |
Protein accession | YP_271047 |
Protein GI | 71280355 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAG ATGATTATGT AGAACAAGCC AGTGAAATTT TTGTTTTATC CGATTCTTTT ATCAGAATTA GGGAATTAAT TGATGATGAA TCATCTACCA TAGATGATAT TTCAGAGGTT ATCTTACTCG ATCCTGCCCT TTCTGGTACG GTATTAAAAT TAGCGAATAG TCCTTTTTTT AGTTATCCCG GTAAAATAGA CACCATATCT AAAGCTGTCT TGGTACTGGG GATTACGGAA GTTTATAACC TTGTTATTGC CTATTTTACG ACGGAAGCTT TCAAAAACAT TGATGCCAAC CAAGATTATC TTGATGAGTT TTGGATAAAA AGTGTTGATT GCGCGTTGTT GATGAAGTTT TTAGGAACTA GTCTAGGTAT TATTAATGCT GAACGTTTAT TTATTTTAGG CTTGTTGCAT AATTTAGGTG AATTAGTTGT TCACCAAATA ACAACGGAAA AACAGCGTGC TTGTGATAGC CAGGATATCA ATTTATTACC TTGGGTGAAG CAACAAGATG TATTAGGATT TACGTTTGGT GAATGTTCTG CCGAACTGTT AAAACAATGG CAGTTACCCT ATAGCATTTT CGCACCTATT CGTGATCAGG ATATTGACGA TCTAAGCCAA TACACTGCAG AAACACAGTT GTTATATATA GCTAAGCGTG TGATGAGTAA GCAGCAAGTG TTTAAAGATC AAAACTTAGA TTTCAACGAC TTGTTAACTG AAGAGCAGTT AGAGCCTATT CGTCTAGATA AAAAAATGCT AGAAAATGCC GTTGATTATT GTGATTTAGA ACGGTTAGGT TTGTTATCAA TTTTAAATCC TAGCGCTTGC ATGCTTTATT AA
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Protein sequence | MTADDYVEQA SEIFVLSDSF IRIRELIDDE SSTIDDISEV ILLDPALSGT VLKLANSPFF SYPGKIDTIS KAVLVLGITE VYNLVIAYFT TEAFKNIDAN QDYLDEFWIK SVDCALLMKF LGTSLGIINA ERLFILGLLH NLGELVVHQI TTEKQRACDS QDINLLPWVK QQDVLGFTFG ECSAELLKQW QLPYSIFAPI RDQDIDDLSQ YTAETQLLYI AKRVMSKQQV FKDQNLDFND LLTEEQLEPI RLDKKMLENA VDYCDLERLG LLSILNPSAC MLY
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