Gene CPS_4398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4398 
Symbol 
ID3520821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4633870 
End bp4634721 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content35% 
IMG OID637286839 
Producthypothetical protein 
Protein accessionYP_271047 
Protein GI71280355 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAG ATGATTATGT AGAACAAGCC AGTGAAATTT TTGTTTTATC CGATTCTTTT 
ATCAGAATTA GGGAATTAAT TGATGATGAA TCATCTACCA TAGATGATAT TTCAGAGGTT
ATCTTACTCG ATCCTGCCCT TTCTGGTACG GTATTAAAAT TAGCGAATAG TCCTTTTTTT
AGTTATCCCG GTAAAATAGA CACCATATCT AAAGCTGTCT TGGTACTGGG GATTACGGAA
GTTTATAACC TTGTTATTGC CTATTTTACG ACGGAAGCTT TCAAAAACAT TGATGCCAAC
CAAGATTATC TTGATGAGTT TTGGATAAAA AGTGTTGATT GCGCGTTGTT GATGAAGTTT
TTAGGAACTA GTCTAGGTAT TATTAATGCT GAACGTTTAT TTATTTTAGG CTTGTTGCAT
AATTTAGGTG AATTAGTTGT TCACCAAATA ACAACGGAAA AACAGCGTGC TTGTGATAGC
CAGGATATCA ATTTATTACC TTGGGTGAAG CAACAAGATG TATTAGGATT TACGTTTGGT
GAATGTTCTG CCGAACTGTT AAAACAATGG CAGTTACCCT ATAGCATTTT CGCACCTATT
CGTGATCAGG ATATTGACGA TCTAAGCCAA TACACTGCAG AAACACAGTT GTTATATATA
GCTAAGCGTG TGATGAGTAA GCAGCAAGTG TTTAAAGATC AAAACTTAGA TTTCAACGAC
TTGTTAACTG AAGAGCAGTT AGAGCCTATT CGTCTAGATA AAAAAATGCT AGAAAATGCC
GTTGATTATT GTGATTTAGA ACGGTTAGGT TTGTTATCAA TTTTAAATCC TAGCGCTTGC
ATGCTTTATT AA
 
Protein sequence
MTADDYVEQA SEIFVLSDSF IRIRELIDDE SSTIDDISEV ILLDPALSGT VLKLANSPFF 
SYPGKIDTIS KAVLVLGITE VYNLVIAYFT TEAFKNIDAN QDYLDEFWIK SVDCALLMKF
LGTSLGIINA ERLFILGLLH NLGELVVHQI TTEKQRACDS QDINLLPWVK QQDVLGFTFG
ECSAELLKQW QLPYSIFAPI RDQDIDDLSQ YTAETQLLYI AKRVMSKQQV FKDQNLDFND
LLTEEQLEPI RLDKKMLENA VDYCDLERLG LLSILNPSAC MLY