| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4394 |
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| Symbol | |
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| ID | 3523013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4629427 |
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| End bp | 4630191 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286835 |
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| Product | serine protease |
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| Protein accession | YP_271043 |
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| Protein GI | 71282538 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCATAC ATATTCCCTT ACTGCTAGTT ATTGCTTCTT TATTTACACC ATACGCGCAA
GCAGATTTTG TTGGCGTTGT TGCTAAAATC AAACCGTCTG TCGTTGGTAT TGGAATACAT
ACACCGACGA GTCGACCACA AAATATTCTA CGAGGCACAG GTTTTGTTAT TGGTGATGGT
CGTTACATTG TTACTAATGA CCATGTATTG CCTACCTTAT TAGATGAAAG TTTGTTACAG
AAAATGGCTG TTTTCATTGG TTCTGGTAAA AATGCTAAAG TAAGAGAAGC CGAAATTGTT
GCAACATCAA GTTTATACGA TCTAGCTATT TTAAAGATCT CTGGGGCAGC CTTACCTGCG
ATGACTTTAG CGAATGAAGA TTTGTACGCA GACGGGAGTT ATATTGCTTT CACCGGTTTT
CCCATTGGCG GCGTGTTGGG TCTTTACCCT GTGACACATC GAGGCATGAT TGCCAGTATT
ACTCCTACTG TTGTTCCTGC AGCTTCTGCA GGACAAATTA ATTTAAAAAT GCTCAAACGT
ATGAGAAATC CTTATTTGGT TTATCAGCTT GATGCGACGG CCTATCCTGG AAACAGTGGC
AGTGCTATGT ATGATATGAA AACAGGGGAA GTGGTTGGCA TAATTAATAA AGTTTTTGTA
CAAGCAACTA AAGAGGCTGT TATTAGTAAC CCTAGTGGCA TCACTTACGC AATACCTGTT
AAATATTTGC ATCAAGTCTT ACGAGAAAAT AACATTAAAC TTTAA
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| Protein sequence | MSIHIPLLLV IASLFTPYAQ ADFVGVVAKI KPSVVGIGIH TPTSRPQNIL RGTGFVIGDG
RYIVTNDHVL PTLLDESLLQ KMAVFIGSGK NAKVREAEIV ATSSLYDLAI LKISGAALPA
MTLANEDLYA DGSYIAFTGF PIGGVLGLYP VTHRGMIASI TPTVVPAASA GQINLKMLKR
MRNPYLVYQL DATAYPGNSG SAMYDMKTGE VVGIINKVFV QATKEAVISN PSGITYAIPV
KYLHQVLREN NIKL
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