| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4388 |
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| Symbol | secB |
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| ID | 3521877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4624112 |
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| End bp | 4624609 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286829 |
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| Product | preprotein translocase, SecB subunit |
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| Protein accession | YP_271037 |
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| Protein GI | 71281405 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG AAAATCAAGT AGAGAACAGT GAAGCAGCAC AACAATCTCC AGAATTCGCA
ATTCAACGTA TTTACACTAA AGATGTTTCT TTTGAAACGC CTAATTCTCC AGCTGTATTT
CAATTAGATT GGAAACCAGA AATCCAATTA GATCTTGATA CACGTTCAAC TAAGCTAGCT
GACAATACTT ATGAAGTTGT TTTATCGGTA ACGGTTACTG CTACAGTGGA AGATAAAACT
GCCTTTTTAG CTGAAGTACA ACAAGCGGGT ATTTTTACTA TTGGCAACTT ACCTGAAGCA
CAATTAGCAC ATACAATTGG CGCTTTCTGT CCTACAACAT TGTTCCCGTA TGCTCGTGAA
ACGGTAGCAA GCTTAGTTAA CCGTGGTTCT TTCCCACAAT TTAACTTAAC ACCGGTTAAC
TTTGAAGGAT TATACGCTTC TTATGTACAA CAACGTGCAA CACAAGAAAA CGTGGCACAA
AGTAGTGAAA CACATTAG
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| Protein sequence | MAEENQVENS EAAQQSPEFA IQRIYTKDVS FETPNSPAVF QLDWKPEIQL DLDTRSTKLA
DNTYEVVLSV TVTATVEDKT AFLAEVQQAG IFTIGNLPEA QLAHTIGAFC PTTLFPYARE
TVASLVNRGS FPQFNLTPVN FEGLYASYVQ QRATQENVAQ SSETH
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