Gene CPS_4386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4386 
Symbol 
ID3519607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4622460 
End bp4622924 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content41% 
IMG OID637286827 
ProductRNA methyltransferase 
Protein accessionYP_271035 
Protein GI71277929 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGATG TTGTTCTTTT TCAACCCCAA ATCCCACCAA ATACCGGTAA TATAATTCGC 
TTATGTGCAA ATTCAGGCTT TCGTTTGCAC TTAATAGAGC CATTAGGTTT TGATTTAGAT
GATAAAAAAT TACGTCGTGC CGGTCTAGAC TACCATGAAT TTGCCGCCAT ACAGCGCCAT
GCAAACTTCA ATGCTTTCCT TGAAAAAGAG CAGCCAAAAC GTGTGCTAGC GATTACCACT
AAAACCAATA ACTTTTATGG TGATATCAGC TTTGCAGCCG GTGATTATTT ATTGTTTGGT
TCAGAAACAG CGGGGTTACC AGAGGAAGTT CGTGCACAAA TTCCTGACGA AAATAAGCTT
AGAATTCCAA TGCTAAAAGA GAGTCGCAGC ATGAATTTGT CAAACGCAAC AGCAGTAATT
GTTTACGATG CATGGCGTCA GCTGGGTTTC CCCAACGCCG TATAA
 
Protein sequence
MLDVVLFQPQ IPPNTGNIIR LCANSGFRLH LIEPLGFDLD DKKLRRAGLD YHEFAAIQRH 
ANFNAFLEKE QPKRVLAITT KTNNFYGDIS FAAGDYLLFG SETAGLPEEV RAQIPDENKL
RIPMLKESRS MNLSNATAVI VYDAWRQLGF PNAV