Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4385 |
Symbol | |
ID | 3520353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4621276 |
End bp | 4622181 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286826 |
Product | cation efflux family protein |
Protein accession | YP_271034 |
Protein GI | 71279891 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.592721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATAA AAAGCTCAAC AGACGATTAT GCATTTTGGG TGCGACTAGC AGCAATATTT TCTACGTCTA CCGCGTTTAT CTTAGTGGTG ATTAAATTGT ATGCGTGGTT GGTAACTGAC TCTAGTGCCA TGCTCGCTTC TACCACTGAT TCTATTTTAG ACTTATTTGC TTCGATAATG AGTATTGTTA TCTTGCGCTT TGCTTTAGCT CCTGCAGATA AAGAGCACAG TTTTGGTCAC GGTAAAGCTG AAAGTCTAGC GGGGTTGGTA CAAGCTTCTT TCGTACTTGG CTCTGCCATA TTATTGATTT TTAGTGGTGT GTCTCGGCTG CTTAATCCAC AAGCGATAGT TCATGGTGAA GTCGCTATTT GGGTAACAAT TATCTCTATT GTATTAACTC TTATTCTAGT TGTGTTTCAG CGTTACGTAA TAAAGCGTAC TGGCTCTATT ATTATCAGTG GTGATGCATT GCATTACCAA TCTGATTTAT TTCTAAACTT AGGCGTTTTA GCGGCAATTA TATTGAGTCA GGGAATATGG TTACAAGCTG ATGGTGTTTT CACTATATTG GTCGCTCTAT ATCTTGTTTT TGGTGCTGGC CAAATTATGG TGCAAAGTGT TTCTCAGTTA ATGGATAGCG AGTTAAGTGA TGAAGAATTG TCGCAAATAA AAACTATCGT TTTGAAACAT AAACAAGCAT TGGGCATTCA CGAATTACGC ACTAGACAGT CAGGAGTACA GAAATTTATC CAATTTCATT TAGAGTTGAG TGACAACTTA TCTTTATTAG AAGCACACAG TATAGGCGAT GAGATAGAGG CTGAAATTTG CCAAGTGTTA GCTCCTTGTG AAGTCTTTAT TCATCAAGAT CCTAGCTCTG TAGTGCAAAG TGAGCAGTCA AAATAG
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Protein sequence | MAIKSSTDDY AFWVRLAAIF STSTAFILVV IKLYAWLVTD SSAMLASTTD SILDLFASIM SIVILRFALA PADKEHSFGH GKAESLAGLV QASFVLGSAI LLIFSGVSRL LNPQAIVHGE VAIWVTIISI VLTLILVVFQ RYVIKRTGSI IISGDALHYQ SDLFLNLGVL AAIILSQGIW LQADGVFTIL VALYLVFGAG QIMVQSVSQL MDSELSDEEL SQIKTIVLKH KQALGIHELR TRQSGVQKFI QFHLELSDNL SLLEAHSIGD EIEAEICQVL APCEVFIHQD PSSVVQSEQS K
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