| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4384 |
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| Symbol | pldB |
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| ID | 3519226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4620237 |
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| End bp | 4621241 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286825 |
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| Product | lysophospholipase L2 |
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| Protein accession | YP_271033 |
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| Protein GI | 71279258 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGTAAAT ACCACTCCTT TAATTCAGAG AAAAACATCA AATACAAACT ACCAAATGAG
ATTACCTTAT TTTGGAATAA AGGCCTATTT GACTCATTTA TAGGGATAGA TAAAGTAAAC
ATACACTATG CGCAATTTAT TCAAGAGCAA GTAGAGTGTC CTACGATAGT CATAGTGCCA
GGGCGCTGTG AGAGCTACTT AAAGTACCAA GAGCTGTCAT TTGATTTATA CCAGCAAGGG
TATAACATTT TTATCATAGA TCATCGAGGT CAGGGACTAT CAGGACGAAT GCTGCTAAAC
GTAAACAAAG GTTATGTTAC AAAATTTCAA GACTATGTGG ATGACTTACG GTATTTCATT
GAAAATATCG TGACACCCAA ATCTTCAGAA AAACCATACC TCTTAGCGCA CTCAATGGGT
GGGACTATTG CCACCCGTTT TATGCAAGAC TCTCCAAATG CAATTAAAGC CGCCGTGATA
TCTTCACCTA TGTTGGGCTT TTATTCTGGT TTGTTACCAA AGAGCATAGC TAAAATACTG
GTAGCCATTA AGCTGAAATT CAATAATATT ATCAGCAATA CGCCATGGTA TTTTTTAGGA
CAAAAAGACT ACTCCCCTGT CAATTTTACT GATAATAAAT TAACTCATTC AATACCGCGC
TATCAATACT TTGTTGATTT GTATAAAAAG AATAAAATCA TCCAACTTGG TGGTGTTACC
ACTCACTGGT TAGCACAAAG TATCGCGGCT CAAAAAGAGC TTTTCTCTAA GATTGTTCAG
CTTAAGACGC CTATATTATT GCTTCAAGCT AGCGGTGATA CTGTCGTTTG CCAACAAGCA
CAAGATGATT TTTGCCAGCA ATTACATACA TTGCAACCAC AATCATGTCC AAATGGCGTA
CCGAGTAACA TTGATAACGC CTTCCATGAG CTATTTTTTG AGACCGATGA TCTTAGAAAT
AAAGCAATAA CACAAAGCCT TGCTTGGTTT GAACAACATA CTTAA
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| Protein sequence | MSKYHSFNSE KNIKYKLPNE ITLFWNKGLF DSFIGIDKVN IHYAQFIQEQ VECPTIVIVP
GRCESYLKYQ ELSFDLYQQG YNIFIIDHRG QGLSGRMLLN VNKGYVTKFQ DYVDDLRYFI
ENIVTPKSSE KPYLLAHSMG GTIATRFMQD SPNAIKAAVI SSPMLGFYSG LLPKSIAKIL
VAIKLKFNNI ISNTPWYFLG QKDYSPVNFT DNKLTHSIPR YQYFVDLYKK NKIIQLGGVT
THWLAQSIAA QKELFSKIVQ LKTPILLLQA SGDTVVCQQA QDDFCQQLHT LQPQSCPNGV
PSNIDNAFHE LFFETDDLRN KAITQSLAWF EQHT
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