| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4370 |
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| Symbol | hslU |
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| ID | 3518888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4601329 |
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| End bp | 4602660 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286811 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_271019 |
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| Protein GI | 71278515 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.347338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATA TGACCCCACG TGAAATTGTT CATGAATTAG ATAGCCACAT TGTTGGTCAA
AGTGATGCCA AACGCGCTGT TGCCATCGCG CTAAGAAACC GATGGCGTAG AATGCAGCTT
GATAAAGATC TGCGTAACGA AGTTACTCCT AAAAATATCT TAATGATTGG GCCTACGGGT
GTTGGTAAAA CTGAAATAGC TCGCCGCTTG GCAAAACTTG CCCACGCACC ATTTATTAAA
GTGGAAGCGA CTAAGTTCAC TGAAGTGGGC TATGTTGGTA AAGAAGTAGA AACTATTATT
CGTGACCTTG CTGATATGGC AATAAAAATG GTTAAAGAAA GTGAGATGGA TCGTGTTAAA
CATCTTGCTG AAGAAGCGGC TGAAGAGCGT ATTTTAGATG TTCTGCTTCC TCCTGCTCGT
GACGGCTTTG GTAACGATGA AAAAAGTGAT GACAGTAATA CTCGTCAAAT TTTTCGTAAG
AAATTACGCG AAGGAAAATT AGATGATAAA GAAATTGAGC TTGACTTAGC AGCACCACAA
GTTGGTGTTG AGATCATGGC ACCTCCAGGT ATGGAGGATA TGACTTCACA ATTACAAAAC
ATGTTCCAAA ACATGTCTAG TGAGAAAACT AACAAGCGCA AACTTAAGAT TAAAGATGCT
CTAAAAGCGT TGCAAGAAGA AGAAGCGGCT AAAATAGTTA ATCAGGATGA CATTAAGCAA
AAAGCTATTG ATGCAGTAGA GCAAAATGGT ATTGTCTTTA TCGATGAAAT TGACAAAATT
TGTAAACGTG CTGATAGCTC TGGCGGTGGG GATGTTTCTC GTGAAGGTGT ACAGCGCGAT
TTACTGCCGT TAGTAGAAGG TTCAACCGTA AGTACTAAAC ATGGCATGAT CAAGACAGAT
CACATCTTAT TTATTGCCTC CGGCGCCTTT CAAATGACTA AGCCATCTGA CTTAATCCCG
GAATTACAAG GTCGTTTACC TATACGAGTA GAATTACAAG CATTAACTGC CGATGATTTT
GTTCGTATAT TAACAGAACC TTTTGCCTCA CTTACTGAGC AATATATCGC ATTACTTGCT
ACTGAAGGTG TGTCAGTAAC TTTTACCGAT GATGGTATTA AAGCAATTGC TGATTCAGCT
TGGCAAGTGA ATGAGACAAC TGAAAACATT GGTGCTCGTC GCTTACATAC TATGATGGAA
CGTTTGGTTG AAGATTTATC ATTTAATGCT GACCAACGCA GTGGTGAGAC CATCAGCATA
GATCAAGCTT ATGTTACTAA GATATTAAGT GAAGTAGTTA AAGACGAAGA TTTAAGTCGC
TTTATTCTTT AA
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| Protein sequence | MSNMTPREIV HELDSHIVGQ SDAKRAVAIA LRNRWRRMQL DKDLRNEVTP KNILMIGPTG
VGKTEIARRL AKLAHAPFIK VEATKFTEVG YVGKEVETII RDLADMAIKM VKESEMDRVK
HLAEEAAEER ILDVLLPPAR DGFGNDEKSD DSNTRQIFRK KLREGKLDDK EIELDLAAPQ
VGVEIMAPPG MEDMTSQLQN MFQNMSSEKT NKRKLKIKDA LKALQEEEAA KIVNQDDIKQ
KAIDAVEQNG IVFIDEIDKI CKRADSSGGG DVSREGVQRD LLPLVEGSTV STKHGMIKTD
HILFIASGAF QMTKPSDLIP ELQGRLPIRV ELQALTADDF VRILTEPFAS LTEQYIALLA
TEGVSVTFTD DGIKAIADSA WQVNETTENI GARRLHTMME RLVEDLSFNA DQRSGETISI
DQAYVTKILS EVVKDEDLSR FIL
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