| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4360 |
|---|
| Symbol | |
|---|
| ID | 3518840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4592247 |
|---|
| End bp | 4592666 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637286801 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_271009 |
|---|
| Protein GI | 71278545 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTATC AAACTGAAAT AACGTTGAAA GCAAGAAAAC GTGGTTTTCA TTTAATCACT
GATGAAGTCC TAAAACAACT GCACGAGCTG AACAAGGTTA ACTGTGGCAT TCTTCATCTT
TTTATAAAAC ACAGCTCTGC TTCCATTACC CTTAATGAAA ATGCCGACCC AACGGTACGC
TCAGATATGG AAGCGCATTT TAATCACTTT GTCCCTGAAA GAGCGCCTTA TTATCAGCAT
ACTTACGAAG GTGATGATGA TATGCCTGCC CATATAAAAG CCAGTCTACT GGGTAATAGC
CTTAGTTTAC CTATTAGTCA TGGGCAATTA AATATTGGGA TTTGGCAGGG AATATATTTA
GGTGAGCATA GAGACCATGC CAGCAACCGA ACGATTGTGG CTACCATCAA TGGAGAGTAA
|
|---|
| Protein sequence | MWYQTEITLK ARKRGFHLIT DEVLKQLHEL NKVNCGILHL FIKHSSASIT LNENADPTVR
SDMEAHFNHF VPERAPYYQH TYEGDDDMPA HIKASLLGNS LSLPISHGQL NIGIWQGIYL
GEHRDHASNR TIVATINGE
|
|---|
| |