| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4338 |
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| Symbol | gcp |
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| ID | 3519156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4572004 |
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| End bp | 4573053 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637286779 |
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| Product | O-sialoglycoprotein endopeptidase |
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| Protein accession | YP_270987 |
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| Protein GI | 71278237 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATTT TGGGTATTGA AACTTCTTGT GATGAAACAG GTATCGCCAT TTATGATGAC
GGTTTAGGTG ATAGTCCTGA AGGTATACTC GCCCATCGTT TGTATAGTCA AATAGCCGTT
CATGCTGATT ACGGTGGCGT AGTACCAGAA CTCGCATCAA GAGACCATGT ACGTAAGACT
ATTCCTCTGA TTAAGGAAGT ATTGGCAGAT GCCAACCTTA CCCCCAAAGA TCTAGACGGT
GTTGCGTACA CTGCTGGTCC TGGTTTAGTT GGCGCACTCT TGGTTGGTTG TTCCATTGGT
CGAAGTTTGG CTTATGGTTG GGAGCTACCC GCAGTTCCTG TACATCATAT GGAAGGTCAT
CTATTAGCGC CTATGCTTGA AGATGATGTA CCTGAGTTTC CTTTTGTCGC TTTATTAGTT
TCTGGCGGAC ATACCATGCT GGTACGTGTC GATGCTATTG GTGAATACAA ACTACTTGGT
GAATCAGTTG ATGATGCTGC CGGTGAAGCG TTTGATAAAA CAGCTAAATT GCTAGGTTTA
GACTACCCTG GTGGACCGGC TTTATCTAAG ATGGCTGAAA GCGGTGAAGC AGGACGCTTT
AAATTACCCC GCCCTATGAC TGATAGACCT GGTTTAGATT TTAGCTTTAG TGGTTTAAAA
ACAGCGGCAG GAACCTTAGT TCGCAAAGAA TGTTTGAATT TGTCAGATAG CGATCTTAAG
CAAACCCATG CTGATATTGC CAATGCGTTT CAACAAGCAG TGGTAGACAC CTTAGCGATA
AAATGTAAAC GCGCCTTGCA ACAAGAAAAA TTAAGCAGAT TAGTAATTGC TGGTGGTGTA
AGCGCCAATA CAGCTTTACG AGAGCAACTG GCGATAACCA CAAAGAAACT TGGTGGCAGT
GTATTTTATC CACGTCCTGA GTTTTGCACT GATAACGGCG CTATGATTGC TTATGCTGGT
TTACAGCGTT TAAAAGCAGG AACAGATGCC GACTTAACTT TTAAAGCTAA CCCTCGATGG
GCGCTCGATT CATTACCTCC AGTAAAATAG
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| Protein sequence | MRILGIETSC DETGIAIYDD GLGDSPEGIL AHRLYSQIAV HADYGGVVPE LASRDHVRKT
IPLIKEVLAD ANLTPKDLDG VAYTAGPGLV GALLVGCSIG RSLAYGWELP AVPVHHMEGH
LLAPMLEDDV PEFPFVALLV SGGHTMLVRV DAIGEYKLLG ESVDDAAGEA FDKTAKLLGL
DYPGGPALSK MAESGEAGRF KLPRPMTDRP GLDFSFSGLK TAAGTLVRKE CLNLSDSDLK
QTHADIANAF QQAVVDTLAI KCKRALQQEK LSRLVIAGGV SANTALREQL AITTKKLGGS
VFYPRPEFCT DNGAMIAYAG LQRLKAGTDA DLTFKANPRW ALDSLPPVK
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