Gene CPS_4319 details

Gene Information

• Locus tag: CPS_4319
• Symbol: upp
• ID: 3522173
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 4545637
• End bp: 4546263
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637286760
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_270969
• Protein GI: 71281701
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTAT TCGAAATAAA ACACCCTCTA GTACAACACA AAATTAGCCT AATGCGCGCC 
AAAGACATGA GTACGCGCAG CTTTCGTCAA TTATCAGCAG AAGTCGGCTC CTTATTAACT 
TACGAAGCGA CTAAAGATCT TGAATTGGAA AACTTCCAAA TGGAAGGTTG GGATGGTGAA 
ATTACCGGTC AACGTCTAGT TGGGAAAAAA GCGACTGTAG TGCCAATTTT ACGTGCTGGC 
ATCGGCATGT TGGACGGTGT ATTAGAGCTA ATGCCTAGTG CAAAAATTAG TGTCGTGGGT 
CTTTATCGTG ATGAAGAAAC GCTTGAGCCC GTTACTTATT TCGAAAAGTT AGCTGGTGAT 
ATAGATCAGC GCCTCGCCTT AATTATCGAC CCTATGTTAG CGACTGGCGG TTCAATGAAT 
GCGACCATCG ACATATTAAA AAAAGCAGGT TGTAATGACA TTCGTGCTTT AGTATTAGTC 
GCTGCACCAG AAGGCATTGA GAAGGTTAAA AGTGCTCACC CAGATGTAGA TATCTATACC 
GCATCGATAG ATGATCATTT GAACGAGAGT GGTTATATCA TTCCTGGTCT TGGGGATGCA 
GGCGATAAAA TATTTGGCAC CAAATAA 

 

Protein sequence

MSVFEIKHPL VQHKISLMRA KDMSTRSFRQ LSAEVGSLLT YEATKDLELE NFQMEGWDGE 
ITGQRLVGKK ATVVPILRAG IGMLDGVLEL MPSAKISVVG LYRDEETLEP VTYFEKLAGD 
IDQRLALIID PMLATGGSMN ATIDILKKAG CNDIRALVLV AAPEGIEKVK SAHPDVDIYT 
ASIDDHLNES GYIIPGLGDA GDKIFGTK