Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4313 |
Symbol | panC |
ID | 3522164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4540792 |
End bp | 4541658 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286754 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_270963 |
Protein GI | 71281692 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG TCAGTCAAAT TAGTGAATTA CGTGCACAAG TAAAAGCATG GCGTCAACAA GGTTTAACCG TTGCTTTTGT CCCTACTATG GGTAACTTAC ATGCAGGCCA TATTTCGTTA GTAGCTGAAG CACACAAACA TGCTGATAAG GTTGTTGCCA GTATTTTTGT GAATCCAATG CAATTTGGCG TAAATGAAGA CATTGAAAAC TACCCGCGCA CGATGATCAA TGATGAGCAA AAATTGACTG CCGCTGGTAC TGATTTACTA TTTACACCGT CACCTGACAT TATTTACCCC AAAGGCCTCG CTAAACAAAG CTTTGTTGAA GTACCAAATA TCTCTGACGG ATATTGTGGG GAGAGTCGTC CTGGTCATTT TCGTGGTGTT GCCACGATTG TCTGTAAACT ATTTAATCTA GTACAACCAG ATGTGGCTTG TTTTGGCTTA AAGGATTATC AGCAAGTACA AGTCATTCAA AGAATGGTTG AAGACTTGTC GATGCCAATC ACTATAATTC CAGTGGCAAC CATAAGAGAA GAAAGTGGTT TGGCTCTGAG TTCTCGTAAT GGTTATTTGA CAGAGGAAGA GAAAGCTATC GCACCTGCCC TACACCAAAG CTTACATTGG TTAGGCGAAC AAATTAGAGC AGGTTATGCT CAGCAAGATA GTATTGATTT TATTGGCTTA GCTAAACATG CTGCTAAGAC AATTAATGAT GCTGGTTTAC ACACAGATTA TCTACATGTC TGTCACGCAG AAACATTGCA GCCAGCAAGT GAAGATGATA CTCAGTTAGT TATTCTAGCG GCAGCACATT GTGGTAAAGC TCGTTTAATT GATAACTTGC AAGTAAACCT AGCTTAA
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Protein sequence | MKTVSQISEL RAQVKAWRQQ GLTVAFVPTM GNLHAGHISL VAEAHKHADK VVASIFVNPM QFGVNEDIEN YPRTMINDEQ KLTAAGTDLL FTPSPDIIYP KGLAKQSFVE VPNISDGYCG ESRPGHFRGV ATIVCKLFNL VQPDVACFGL KDYQQVQVIQ RMVEDLSMPI TIIPVATIRE ESGLALSSRN GYLTEEEKAI APALHQSLHW LGEQIRAGYA QQDSIDFIGL AKHAAKTIND AGLHTDYLHV CHAETLQPAS EDDTQLVILA AAHCGKARLI DNLQVNLA
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