Gene CPS_4313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4313 
SymbolpanC 
ID3522164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4540792 
End bp4541658 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content40% 
IMG OID637286754 
Productpantoate--beta-alanine ligase 
Protein accessionYP_270963 
Protein GI71281692 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG TCAGTCAAAT TAGTGAATTA CGTGCACAAG TAAAAGCATG GCGTCAACAA 
GGTTTAACCG TTGCTTTTGT CCCTACTATG GGTAACTTAC ATGCAGGCCA TATTTCGTTA
GTAGCTGAAG CACACAAACA TGCTGATAAG GTTGTTGCCA GTATTTTTGT GAATCCAATG
CAATTTGGCG TAAATGAAGA CATTGAAAAC TACCCGCGCA CGATGATCAA TGATGAGCAA
AAATTGACTG CCGCTGGTAC TGATTTACTA TTTACACCGT CACCTGACAT TATTTACCCC
AAAGGCCTCG CTAAACAAAG CTTTGTTGAA GTACCAAATA TCTCTGACGG ATATTGTGGG
GAGAGTCGTC CTGGTCATTT TCGTGGTGTT GCCACGATTG TCTGTAAACT ATTTAATCTA
GTACAACCAG ATGTGGCTTG TTTTGGCTTA AAGGATTATC AGCAAGTACA AGTCATTCAA
AGAATGGTTG AAGACTTGTC GATGCCAATC ACTATAATTC CAGTGGCAAC CATAAGAGAA
GAAAGTGGTT TGGCTCTGAG TTCTCGTAAT GGTTATTTGA CAGAGGAAGA GAAAGCTATC
GCACCTGCCC TACACCAAAG CTTACATTGG TTAGGCGAAC AAATTAGAGC AGGTTATGCT
CAGCAAGATA GTATTGATTT TATTGGCTTA GCTAAACATG CTGCTAAGAC AATTAATGAT
GCTGGTTTAC ACACAGATTA TCTACATGTC TGTCACGCAG AAACATTGCA GCCAGCAAGT
GAAGATGATA CTCAGTTAGT TATTCTAGCG GCAGCACATT GTGGTAAAGC TCGTTTAATT
GATAACTTGC AAGTAAACCT AGCTTAA
 
Protein sequence
MKTVSQISEL RAQVKAWRQQ GLTVAFVPTM GNLHAGHISL VAEAHKHADK VVASIFVNPM 
QFGVNEDIEN YPRTMINDEQ KLTAAGTDLL FTPSPDIIYP KGLAKQSFVE VPNISDGYCG
ESRPGHFRGV ATIVCKLFNL VQPDVACFGL KDYQQVQVIQ RMVEDLSMPI TIIPVATIRE
ESGLALSSRN GYLTEEEKAI APALHQSLHW LGEQIRAGYA QQDSIDFIGL AKHAAKTIND
AGLHTDYLHV CHAETLQPAS EDDTQLVILA AAHCGKARLI DNLQVNLA