| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4293 |
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| Symbol | |
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| ID | 3521647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4523601 |
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| End bp | 4524605 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286734 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_270943 |
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| Protein GI | 71281176 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0725016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATA TTAAATCACA CACTACGCCA ACAGCTTCGG ATGTACCGGT TGTAAATGAG
CTGGCTCTTA AACAAATTAA TAGCCAAATT GCTAACCAAT TAAATACCGG TGTTTTGGTA
ATCGATGCTG ATTTTAATAT TGTTATTTGG AATCGTTTTT TACAGGTCCA TACCGATAAA
GTACCAGGTA GTATTATTGG GCAATCTATT TTTAGTGCAT TTCCAGAGCT GCCACAACGT
TGGTTATCTC GCAAGCTTAG TTCTGTTTTA CAATTAAATA CGCCGAGCTT TTGTTCCTGG
CAACAAAGAC ATCACTTATT CGAATTACCT CACACTAGAC CGATCACGAC AGATAGTGAG
TTTATGGCGC AAAACTGCAC CTTTCTACCT ATAGAAACTG ATGTTAACGG CAAACATATT
TGTATCTTAA TTGAAGATGT TACCGATGCT TGTCATTATC AAATGCAATT ACAAAAGACC
TTAGCTGAAA TAGCGCAAAT AAGTCGTATA GATGGTTTAA CTCAAGTTTA TAATCGAAGG
CATTGGCAAG ACTCCCTAGA ACAAGAATAC GCAAAAGCAC GACGACATGA TAAAAAGTTA
TCCTTGATAA TGCTTGATTT AGACCATTTT AAATTGCTCA ATGATAATTA TGGCCATCAA
GGTGGCGATA TGGTGTTAAT TGAGGTCAGT GCTTTAATAA GTACCTTATT AAGAGTTGAA
GATACCTTTG GGCGTTATGG TGGAGAAGAG TTCGCTATTA TTTTACCTGA GACAGATTCT
GCAGGAGCAA TAGAACTTGC ACAGCGTATT TGTAGAATAA TAGCCACAAC ACCTTTCACT
TATAATGATC AGGTGATAAA GGTAACAGTC AGTTTAGGCG TTGCACAACT TAGTAGCAAA
GAGTCTAATT ATGAAGAACT GATTACCCAA GCAGACAGTG CTTTATATCA AGCAAAATCT
CAGGGACGGA ATCAAGTATG TAATGCTGCG GAACTTGTTT CTTGA
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| Protein sequence | MSDIKSHTTP TASDVPVVNE LALKQINSQI ANQLNTGVLV IDADFNIVIW NRFLQVHTDK
VPGSIIGQSI FSAFPELPQR WLSRKLSSVL QLNTPSFCSW QQRHHLFELP HTRPITTDSE
FMAQNCTFLP IETDVNGKHI CILIEDVTDA CHYQMQLQKT LAEIAQISRI DGLTQVYNRR
HWQDSLEQEY AKARRHDKKL SLIMLDLDHF KLLNDNYGHQ GGDMVLIEVS ALISTLLRVE
DTFGRYGGEE FAIILPETDS AGAIELAQRI CRIIATTPFT YNDQVIKVTV SLGVAQLSSK
ESNYEELITQ ADSALYQAKS QGRNQVCNAA ELVS
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