Gene CPS_4284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4284 
Symbol 
ID3519643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4515389 
End bp4516342 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content38% 
IMG OID637286725 
ProductD-isomer specific 2-hydroxyacid dehydrogenase family protein 
Protein accessionYP_270934 
Protein GI71278159 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCAG TATTTTTAGA TGAACAAACC TTCAGTTCTA CCATTGATTT TTCTGTCATT 
GAACAACAGG TAAGCCAGTT AGTTTGTTAT GCCAATACAT CACCTAATGA GGTTATAAAG
CGCTGCCTAG ATGCAGATAT TATTATTACC AATAAGGTAC AGTTAACGGC AGAAATGCTA
TCTGCCTTAC CAAACGTAAA GCTCATCTGT ATCAGCGCAA CGGGTTATAA CAATGTAGAT
ATTGAAGCTG CTCGTCACTT AGATATTGCC GTAACGAATG TTAGCGGTTA CGCAGGGCAA
TCTGTTGCAC AATATGTTTT TGCCCAATTA CTCGAGTATT ATCAACAAAC GAGTCACCAT
AATAGCAACA CGGAACAAGG TTTATGGTCA AGAAATGATA CTTTTTGCTA TCACGGTAAT
AGCATCAGCG AATTAGCAGG AAAAACACTC GGTATTATTG GTTACGGAAG TTTAGGTAAA
GCTGTTGTTG ATATAGCACA GGCTTTCAAT ATGAAAGTGC TCATTAGTGA ACGCCCTCAG
GCCAGCACTA TTCGCGCAGA GCGAGTTTCT TTTGAACAGG TTATTGAAGA GGCTGATATT
ATCAGTTTAC ATTGCCCACA AACCCCTGAA ACTGAAAACT TCATTAATGA AAGTGTACTA
GCTCGCATGA AAAATACTGC CGTATTAGTT AATACTGCTC GAGGTGCATT AATTGATGAA
CCTGCGTTAT TGGATGCTTT AAAAACAAAA GAAATTGCCT ATGCTATTTT AGATGTATTA
TCACAAGAGC CGCCTCCAGC TGATCACATA CTACTTAATA ACAAGCTTTC TAATTTAAAA
ATAACCGCAC ATATCGCTTG GGCTAGCAGT GAAGCTCAAC AGCGTTTGAT TGATTTATTA
AGCCAAAATA TTATTGCCTT TACCCAAGGC GAACAATTAA ATCGTTTAAC TTGA
 
Protein sequence
MRAVFLDEQT FSSTIDFSVI EQQVSQLVCY ANTSPNEVIK RCLDADIIIT NKVQLTAEML 
SALPNVKLIC ISATGYNNVD IEAARHLDIA VTNVSGYAGQ SVAQYVFAQL LEYYQQTSHH
NSNTEQGLWS RNDTFCYHGN SISELAGKTL GIIGYGSLGK AVVDIAQAFN MKVLISERPQ
ASTIRAERVS FEQVIEEADI ISLHCPQTPE TENFINESVL ARMKNTAVLV NTARGALIDE
PALLDALKTK EIAYAILDVL SQEPPPADHI LLNNKLSNLK ITAHIAWASS EAQQRLIDLL
SQNIIAFTQG EQLNRLT