| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4276 |
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| Symbol | |
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| ID | 3521793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4507618 |
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| End bp | 4510014 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286717 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_270926 |
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| Protein GI | 71281321 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAA AAAAATCGCA GGTATTTAAA AAGTCTACAC TATGCTTAGC ATTGAGCTCT
GCACTGGCTT TACCGGTAAA TAGTTATGCA GAAGAGTCTG CAGCGGATGG TATAGAGCGT
ATCCAAGTGA CGGCCTCTCG TCGAGCATCC ACCGTGCAAG AGGCGCCTTT AAATATCACG
GCACTGGATG GTGATGTGAT GAAAGATCAA AATATAACTC AGTTATCTGA TGTTGCTCGT
TGGGTGCCAG GCTTAAGTGT TGCTGATCAA GGTGGTCGTA CAGGTTCTCC AATTATTGTT
CGTGGTTTAA ATACCAATTC TTCCGGTCCT GATTCTGATG CAGGTACTGT TGCCACATAC
ATTGGCGAAA TTCCCCTTGT TGTCGATATG AAACTTATTG ATGTTGAACG TGTCGAGGTT
TTAATTGGTC CACAAGGCAC TTTATATGGC GCGGGCACGC TTGGCGGCGC TATCCGTTAT
TTACCCAATA AGCCGATACT AGACGAAACA TCAGGCTCAC TTTATGGTGA TTTTTTTACC
TTATCTGAAA GTGATGATAC CGGTGGGGAA GCTGGTTTTG TGTTTAATAC GCCACTTATT
GACGATGAAT TAGCAGTACG TTTTGCCGTT AATTATTTGG ATGAACCTGG CTATATTGAT
TACAATTATG TGGTTCGAGA AGGTGGCGTG TCATTACCTG ACCCTGATTG GTCAGATACT
GATGCCGTTG ACAGTAACTT GAGACAAGTG GCAGACGCTA ATTTTGAGCA AACAACGACG
GCAAAAGCGA TGATTCGCTG GCAACCCAAT GATATTTTCG ATGCAACCTT GTCTTACTTT
TATCAAAAAC AAGAAATTGG TGGCCGTTCG ATCGTTCATC ACAATAGTTT AAGTGAAACG
AATCCTTTAT CTACTGTGAT AGGTGAATAT GAATCAGGTT ATCGTTACCA AGAGCCAAGA
GAAAAAGAAG ATACTTTACT TAGTTTAGAA ATGACTGTTG ATTTAGGTTT TGCGGAGCTG
ACTTCTGCAA CCGGTTATTC AGAATTTGAA GCCCTTGGCC AGCGCGATCA AACCGATTTA
TTGATTCGTT TAGATTATAG CTATGAAGAA TTCCCAGGCT TCTCTGCGTT TACGCGAGAA
GTTGATGAAG CTGAAAATTT CACCCAAGAA ATTCGTTTAG TCTCTACGGG AGATTCAGCA
TTCTCTTGGA TAGTTGGTGC TTATTATAAT AAATTTGAAA GCTTTAACGA TAGTCGTGAG
TTCACACCGG GTTTTGATCA ATACGCGGTT GATAACTTTG GAGCAGAGCA GTTACGTCCT
GACTCTCTGG AATATGTCTC TGTGGATAAA GCAGAAATTA CTGAGTCGGC ACTTTTTGGT
GAAATTACCT ATAGCGTAAC GGATAAGTTA ACTCTGATGT TGGGAGCACG CTTCTATCAA
TATGATGTCG TCGCTCAATC TGATGCGGAT TTACCTTTGT TAAACACGAT TTATGATGCG
AGTTATGATC CAACCTTCAT TGATATAGAA CTAATGGAGT CGAAAGCTGA TGATGATGGC
AGCCTATTTA AAGTTAATGC CAGTTATCAA TTCAGTGATG ATGTCATGGG GTACGCCACG
ATAAGTGAAG GCTTTCGAAT TGGTGGCTCA AATGGAATCG CCGCTTGTGA TGAAGATATT
GGACAGCAGC AAAGCGTTTG TGCTCAACCT GATGAATTAT TGTATGAGCC AGATACCACC
ACAAACTACG AGTTAGGCTT TAAGAGCACT TGGTTCAGTA ACCAATTACA CTTTAATGCC
GCACTCTTTA TGGTGGAGTG GGACAATGCT CAAATTGAGG GAGCAACGGA AGTTGGTCAA
CAACCTTATA CCTCTAATGC GGGTGAAGCT GAAGCGTCAG GGGTTGAAAT ATCAAGTAGA
GCGATGTTGA CGGATAGTCT TATTGCTTAT GCAACTTATG CTTATACTAA GGCAGAATTG
ACCAGTGATG ATGTTCCTGA TATTGGTTTT TCAGGAGATC GCTTACCCGG TTCACCAGAG
CAACAATTTT CATTAGGTGC AACCTATTCA ACTGAAGTTT TTGGTGGTAC AGGTTTAGAT
GTTAACTATG GTTTAACCTA TCAAAGTGAT GTTTATTCTA AAGTTGGACT ACGAAATAAT
GGCGAAGCAT TACCTGGTTA TGCGTTAAGT AATATGTCGG CACGATTCTC TGAAGATGCT
TGGTCGGTGA CCTTATACGT AGATAACATG TTTGATAAGT ATGCCTACAG CTCTGTACGC
CGCGATGTTG GTGATATAAC TACTGCAAAC GACCCCGCAA TTCAGCGTAA TTATGGCCAC
TACCTAATTA CGCCACGTAA AGTTGGCGTG CGTTTTGATT ACTTATTTGA CCTATAA
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| Protein sequence | MKVKKSQVFK KSTLCLALSS ALALPVNSYA EESAADGIER IQVTASRRAS TVQEAPLNIT
ALDGDVMKDQ NITQLSDVAR WVPGLSVADQ GGRTGSPIIV RGLNTNSSGP DSDAGTVATY
IGEIPLVVDM KLIDVERVEV LIGPQGTLYG AGTLGGAIRY LPNKPILDET SGSLYGDFFT
LSESDDTGGE AGFVFNTPLI DDELAVRFAV NYLDEPGYID YNYVVREGGV SLPDPDWSDT
DAVDSNLRQV ADANFEQTTT AKAMIRWQPN DIFDATLSYF YQKQEIGGRS IVHHNSLSET
NPLSTVIGEY ESGYRYQEPR EKEDTLLSLE MTVDLGFAEL TSATGYSEFE ALGQRDQTDL
LIRLDYSYEE FPGFSAFTRE VDEAENFTQE IRLVSTGDSA FSWIVGAYYN KFESFNDSRE
FTPGFDQYAV DNFGAEQLRP DSLEYVSVDK AEITESALFG EITYSVTDKL TLMLGARFYQ
YDVVAQSDAD LPLLNTIYDA SYDPTFIDIE LMESKADDDG SLFKVNASYQ FSDDVMGYAT
ISEGFRIGGS NGIAACDEDI GQQQSVCAQP DELLYEPDTT TNYELGFKST WFSNQLHFNA
ALFMVEWDNA QIEGATEVGQ QPYTSNAGEA EASGVEISSR AMLTDSLIAY ATYAYTKAEL
TSDDVPDIGF SGDRLPGSPE QQFSLGATYS TEVFGGTGLD VNYGLTYQSD VYSKVGLRNN
GEALPGYALS NMSARFSEDA WSVTLYVDNM FDKYAYSSVR RDVGDITTAN DPAIQRNYGH
YLITPRKVGV RFDYLFDL
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