| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4260 |
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| Symbol | |
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| ID | 3521175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4490690 |
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| End bp | 4492699 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286701 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_270910 |
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| Protein GI | 71280706 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTAC AGCAAAAATT GTCCCGTACT TTCTTTTCTG CCATCACCTC TATTTTACTC
GTATTACTTA TTGGTATTTA TTGGTATTCA GTGCCTTTAA TTAATAAAGA AGTCTACAAA
ATTGAAAAAA ATGCCAGTCG TCTAGTCTTG AATAATGTCT TTGAGTTAGC CAGTACCATG
CAACTCAACC TAAAACCTCA AAAAGAAGAA GTTGTTCATA GACTACGTCA AATAATCAAA
AATAGTGTCA TTGCCAAGAC GGGTTACCTT TTCATTTTTG ATGAACAAGG AAATATGCTG
CATCACCCTA ACCCCAATAT TAACGGCACC AACGCTTTAC AGCTTAAAGA TCCAAAAACA
GGAAAGCCCA TTTTACAAGA GCTCATTGCT GTTGCCGATA CCGGAAAAGA GCTTGAATAT
CTTTGGGATA AACCTAGCGA TGCCAATAAC TATAGCTATA GTAAATTATC CTTGGTACGA
CACCTACCTG AACTGGGTTG GTATATTTGT TCTTCTGTCT ATATCGACGA ATTGCAAAGC
AGCGGAAAAC TGCTTAGCCA GCGCATTTTA ACCATGGGTT TTATTACCTT CATGTGTGCA
ATTTTTTTAG CGTTAATTTT TTCCTATTGG GTAACCAAAC CAATCAATAC ACTGGCTTTA
ATAGCCAGAA AAGTGAGTCA AGGCGACTTA ACCGTAACCA GTGGAATATC ACGTACCGAT
GAATTAGGTA TTTTAGGCAA AGCCTTTGAC GACATGGTAG AGCAAATGCG TGAGAATATT
GAAATGCTTG ATTTAAAAGT TGCCTCACGT ACACAAACGT TAGCCACAAC CAATGCACAA
CTACAACAAG CACTGAGCGA GAGTCAACAA GCACAACAGC AATTAGCACA AGTACAGCAC
ATCAATGCTG TTGGGCAACT TGCTGGCGGA TTAGCCCACG ACTTTAATAA TATACTCACT
ATTATTTTAG GTAACCTACT CGCAGCACAA CAAGATAATG AGAATAATAG GCCATTATTA
TTACGCTTGT TGCCTGCAAT AAAAGCCTCA CGTAAAGGCA GTGACATTAC TAACCGTTTA
TTAGCCTTTT CCCGAAGACA ATATTTAGTG CCTTGTAGAG TGAATATAAA GGCATTAATT
GACGAAACAA TCGAATTATT AAAAGGTTCT TTACCCAGTA AAATTACAAT TAACATAGAT
TATTCATGTG ACAATTTGCA GGTTTATGTC GATGCTAATC AGCTAGAGAA TTGTTTAATT
AATTTGGTGT TAAATGCCAA AGATGCCATG CCAAATGGCG GGATTATCAC TATCATTGTC
AATAAAAGAG TAGTGAATGA ATTTTTACAG TTTGATGAAG AAGTCACCTT CGGGGACTAC
CTTGATGTCA CTATCACTGA TGATGGTAAT GGTTTCTCAG AACAAGCAAT AAACAAAGCA
TTCGAACCCT TTTTTACTAC CAAAGATACT CACCAAGGCT CGGGTCTTGG CTTGAGTATG
GTGTTTGGCT TTATCAAACA ATCCCAAGGT TATATTCGCA TTGCTAACCA ACAAAATGGC
GGCGCTAAAA TATCGTTATT ATTGCCCTTA CTTACTTATG AAGAAGAAAA CAACTCAAAA
GCAATACTTC ATGACGATAC AAGAATAACG AAAGAAACTG GCTTCTCGAA TAAACTGATT
TTATTAGTTG AAGATGATCA TGATGTTCGC GCGATTATTA GAGAGCAGTT AATTTCATTT
GGCCTAAATG TTATCGAGGC AAATGATAGT GATGAAGCCG AGCAACTTAT TGATACTATT
AATGACTTAT ATGGTATGGT TTCAGATATT AGTATGCCGG GTAATAAGGA TGGTTTTGAA
CTGGCTACCT TGCTAAAAAG TCGCTCCCCT AACTGTAAGA TTGTACTCAT GAGTGGCTAT
TTTCAACAGC AGCAAAAACC CAATAAAGAC ACGCCTATTT TGTTAAAAAA ACCTTTTGTG
GCAAGTAAGT TATTTCAAGC ATTACAATAA
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| Protein sequence | MFLQQKLSRT FFSAITSILL VLLIGIYWYS VPLINKEVYK IEKNASRLVL NNVFELASTM
QLNLKPQKEE VVHRLRQIIK NSVIAKTGYL FIFDEQGNML HHPNPNINGT NALQLKDPKT
GKPILQELIA VADTGKELEY LWDKPSDANN YSYSKLSLVR HLPELGWYIC SSVYIDELQS
SGKLLSQRIL TMGFITFMCA IFLALIFSYW VTKPINTLAL IARKVSQGDL TVTSGISRTD
ELGILGKAFD DMVEQMRENI EMLDLKVASR TQTLATTNAQ LQQALSESQQ AQQQLAQVQH
INAVGQLAGG LAHDFNNILT IILGNLLAAQ QDNENNRPLL LRLLPAIKAS RKGSDITNRL
LAFSRRQYLV PCRVNIKALI DETIELLKGS LPSKITINID YSCDNLQVYV DANQLENCLI
NLVLNAKDAM PNGGIITIIV NKRVVNEFLQ FDEEVTFGDY LDVTITDDGN GFSEQAINKA
FEPFFTTKDT HQGSGLGLSM VFGFIKQSQG YIRIANQQNG GAKISLLLPL LTYEEENNSK
AILHDDTRIT KETGFSNKLI LLVEDDHDVR AIIREQLISF GLNVIEANDS DEAEQLIDTI
NDLYGMVSDI SMPGNKDGFE LATLLKSRSP NCKIVLMSGY FQQQQKPNKD TPILLKKPFV
ASKLFQALQ
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