| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4252 |
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| Symbol | ispG |
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| ID | 3518903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4480764 |
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| End bp | 4481894 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286693 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_270902 |
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| Protein GI | 71278491 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAAAG AATCACCAAT TATACGCCGT GTCTCTCGTC AAATTATGGT CGGTAATGTA
CCTGTTGGCG GCGATGCGCC TATTACTGTG CAGTCAATGA CAAATACATT GACCACTGAT
GTAGCGGCAA CTGTAGCGCA AATAAAAGCG TTGGAAGCCG TTGGCGCTGA TATTGTTCGT
GTTAGTGTAC CGACAATGGA TGCTGCAGAA GCTTTTCGTG AAATAAAAAA ACAAGTGAAC
GTTCCTTTAG TTGCTGATAT TCATTTTGAT TATCGTATTG CCTTAAAAGT TGCGGAATAC
GGCGTTGATT GCTTGCGTAT TAATCCCGGT AACATTGGTA ATGAAAATAG AATCCGTAGT
GTGGTTGAGT GTGCTCGCGA CAATAATATT CCTATTCGAA TTGGTGTAAA TGGTGGTTCC
TTAGAAAAAG ATATTCAAGA AAAGTATACT GAGCCAACGC CAGAGGCTTT GTTAGAGTCG
GCTATGCGCC ATGTTGATAT TTTAGATAGA CTCAATTTCA ATGAGTTTAA AGTCAGTGTT
AAAGCGTCTG ACGTTTTTTT AGCGGTCGAA TCTTATAAAT TATTAGCAAA ACAAATTGAT
AACCCATTAC ATTTAGGCAT TACCGAGGCC GGCGGTTTGC GCTCTGGTTC GGTAAAGTCC
TCCGTTGGTT TGGGCTTATT ATTAGCTCAA GGAATTGGCG ATACTATACG CATATCACTC
GCAGCTGATC CCATTGAAGA AATTAAAGTG GGTTTTGATA TTTTAAAATC ACTTAAATTA
CGTAGTCGCG GTATTAACTT GATAGCTTGC CCAAGTTGTT CTCGACAAGA GTTTGATGTG
GTATCAACAG TTAATGCTTT AGAGCAACGT ATTGAAGATA TTATGACGCC GATGGATGTC
TCAATTATTG GCTGTATTGT TAATGGTCCA GGTGAAGCGA TGGTCTCAGA CCTTGGCTTA
ACGGGGAGCA GTAAAAAAAG TGGTTATTAT TTAGATGGTA TACGCCAAAA GGAACGCTTT
GATAACACTG ATCTTGTTGA CCAACTAGAG CAACGTATCC GCGCGAAAGC ACGTTCAATG
AGTGAGCGTC TTGATGAAAA AAACAAAATT GATATCCTAA CAAAAGACTA A
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| Protein sequence | MFKESPIIRR VSRQIMVGNV PVGGDAPITV QSMTNTLTTD VAATVAQIKA LEAVGADIVR
VSVPTMDAAE AFREIKKQVN VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNENRIRS
VVECARDNNI PIRIGVNGGS LEKDIQEKYT EPTPEALLES AMRHVDILDR LNFNEFKVSV
KASDVFLAVE SYKLLAKQID NPLHLGITEA GGLRSGSVKS SVGLGLLLAQ GIGDTIRISL
AADPIEEIKV GFDILKSLKL RSRGINLIAC PSCSRQEFDV VSTVNALEQR IEDIMTPMDV
SIIGCIVNGP GEAMVSDLGL TGSSKKSGYY LDGIRQKERF DNTDLVDQLE QRIRAKARSM
SERLDEKNKI DILTKD
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