| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4237 |
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| Symbol | |
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| ID | 3521770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4462873 |
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| End bp | 4464945 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286678 |
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| Product | RecQ domain-containing protein |
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| Protein accession | YP_270887 |
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| Protein GI | 71281299 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACC CACAAGATTA CTCTCATAAA GAATGTCTTA AAGCATCACT TCTCGAGACC
TTTGGCTTCG ATGGCTTTCG CCCCGGGCAA GAGCAGACCA TTACGCAATT GCTTAAAGGC
CAATCAAGTT TGTCTATATT CCCGACAGGC TCGGGTAAGT CGTTATGTTA TCAGTTAACT
GCACTGCATT TACCGCATTT AACCTTAGTG GTATCGCCTT TATTAGCTTT GATGAAAGAT
CAATTGTCGT TTCTTGCAAG CAAAGGTATT AAGGCGGCAA GTATTGATTC GACCTTAAAA
GGCAACGAAG CACAAACCGT CATGGCAGGT GTGCGCGATG GCGATATTAA AGTATTAATG
GTGTCAGTTG AGCGTTTTAA GAATGAACGC TTTAGACAGT TTATTGAATC TGTACCTGTT
TCTATGCTGG TGGTTGATGA AGCGCATTGT ATTTCTGAGT GGGGGCATAA TTTTAGACCC
GATTATTTAA AGCTACCGAG TTATTGCCAA GCGTTGAATA TTTCATTAGT GTTGTTACTT
ACCGCGACGG CAACGCGTAA AGTAAAACAA GATATGGCAG CTAAGTTTGC TATTCGAGAT
GAACATATTG TGCAAACAGG CTTTTATCGA TCTAACCTTG ATTTAAGTGT GCTACCTGTT
ACGCAAGCGC ATAAAAACAA GCAACTTGAG CAAATCATTT CTGCTCAACA AGGTGCTGGT
ATTGTTTATG TTACCTTGCA ACATTCAGCT GAAACAGTCG CGCAATATTT AAAACAGCAA
GGCATCAATG CTTGTGCTTA CCATGCTGGT TTTGACAGTG ATACGCGCAG TCAAATTCAA
CAAGACTTTA TGGCAGGTAA AATACAGGTT ATTGTCGCGA CTATTGCCTT TGGTATGGGC
ATTGATAAAA GTAATATACG TTTTGTTATT CATTATGACT TGCCAAAGTC TATAGAAAAC
TACAGCCAAG AAATAGGACG AGCAGGGCGA GATGGGCTGC CTTCGCAGTG TTTTACCTTA
GCTAATCTTG ATGGCTTAAA TACCGTTGAA AACTTTGTTT ACGGAGATAC ACCTGAGTTT
ACCGGCATTG AAATGTTATT AAATACAATA AAATCAGAGG TAATAACAAG CACTCACGTA
GGCATAAGTG ACAATCGGTC TGAAGGAAAG TGGGAGTTAC AAATATTGCA GTTGTCTAAT
GCTGTTAATA TTAAACAACT TCCGCTAAAA ACCCTATTAG TACAGTTAGA GTTAGCGGGC
GTGATTGAAC CACTTTATGC TTACTTTGCT GACTTTAAAA TTAAACTATT AAAACCTAAA
GCTGAAATTA TCAATAGTTT TAATGATCAA CGTAAAGACT TTTTACAACG TATCTTTAAT
GCTACAGACT TTAAAAAAGT CTGGGGTAGT TTGAATTTTG ATACTTTACT GCAAGATCAA
AGTATTGAAC GTAATCGTGT TATAGCCGCT CTTGAATACC TACAAGAACA ACAATTGATA
GTGCTTGAAA CTAAAGGTAT GACTGAGGTA TTTAATATAA AGCTGAATGA ATTGGCAGAT
CCTAGTTTGT GCCAAACACT CAGTAATTAT TTTAAAGATA ATGAAGAAAA AGAAATTAAA
CGTATCGCCA CTTTAGTACG TTTTTTCCAG CTCGATACTT GTTTAACGGT AAATTTGGCG
CGCTACTTTG ATGATACTAG TTTCGATGAT AAAAGGTTTG ACGGTAATAG CTCCGATAAT
AATAGTCTCG ATTCAGCTCG CAATTCAGGA ACAGTCCCAC AATGTGGTCA CTGTAGTGTT
TGTCGTGGTC AAGTGGCAGT ACTTGAGCAT TCTCAAGCTC AGATCCCATG GCCGAGTGAT
GAAGCCTTAA AGCAGGGCAT GACGGAATTG GCTGAACGAC TTAGCGGAAA AATAAATCAG
CCATTATCGA TTGAAAGTTT TTGCCGATTT TTTGCTGGTA TGTCAGTGCC ATTGTTTGGT
CGCAATAAAG TAAGACAATT ATCTGGCTTT GGCGTGTGCG AACAGCAACG ATACCAAGCT
ATACTTGAAA AACTGGCCAG TTTAAGCAAG TAA
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| Protein sequence | MNNPQDYSHK ECLKASLLET FGFDGFRPGQ EQTITQLLKG QSSLSIFPTG SGKSLCYQLT
ALHLPHLTLV VSPLLALMKD QLSFLASKGI KAASIDSTLK GNEAQTVMAG VRDGDIKVLM
VSVERFKNER FRQFIESVPV SMLVVDEAHC ISEWGHNFRP DYLKLPSYCQ ALNISLVLLL
TATATRKVKQ DMAAKFAIRD EHIVQTGFYR SNLDLSVLPV TQAHKNKQLE QIISAQQGAG
IVYVTLQHSA ETVAQYLKQQ GINACAYHAG FDSDTRSQIQ QDFMAGKIQV IVATIAFGMG
IDKSNIRFVI HYDLPKSIEN YSQEIGRAGR DGLPSQCFTL ANLDGLNTVE NFVYGDTPEF
TGIEMLLNTI KSEVITSTHV GISDNRSEGK WELQILQLSN AVNIKQLPLK TLLVQLELAG
VIEPLYAYFA DFKIKLLKPK AEIINSFNDQ RKDFLQRIFN ATDFKKVWGS LNFDTLLQDQ
SIERNRVIAA LEYLQEQQLI VLETKGMTEV FNIKLNELAD PSLCQTLSNY FKDNEEKEIK
RIATLVRFFQ LDTCLTVNLA RYFDDTSFDD KRFDGNSSDN NSLDSARNSG TVPQCGHCSV
CRGQVAVLEH SQAQIPWPSD EALKQGMTEL AERLSGKINQ PLSIESFCRF FAGMSVPLFG
RNKVRQLSGF GVCEQQRYQA ILEKLASLSK
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