| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4229 |
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| Symbol | nirN |
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| ID | 3518912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4453209 |
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| End bp | 4454837 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286670 |
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| Product | heme-binding protein NirN |
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| Protein accession | YP_270879 |
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| Protein GI | 71278461 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAC ATCCTTTTCT AATGTCGATT TCTATCGCCC TTTTATGTGT TTTTTTTGCC
GTCAATACTG CCAACGCAGC GCCAGCCAAA AAGACCACAA TGTCAGCAGC AGAGAAAGTT
GCAGCCAAAA AACTTTATCA AGACAATTGT CAAAGCTGTC ATGGCGTTGA TCGATTAGGC
GCTATGGGGC CTGCATTATT ACCAGAAAAT CTTGCCCGTT TTCGCAAAAA CAAAGCAATT
AAGGTTATCA ATACCGGTCG TGCTGCCACG CAAATGCCCG CTTTCAATAA AACGTTGACT
GAGTCTGAAA TTACCAGCTT AGCAAACTAT ATATATACGC CATCAAAAGC CTCACTTAGC
TGGACCGTTG CTGATATTAA CGCCTCAAAA GTACAACATT TTGACCAAAG TAAATTACCC
AATGAAGCAC AATTTGACGC TGATTTAATG AATTTATTTA TTGTTGTTGA GTTAGGTGAC
CACAGTGCCA CCTTATTGAA CGGCGATACC TTTGAACGCT TAGATCGCTT TAAAACTCGC
TTTGCTTTAC ATGGTGGGCC AAAATATTCA CCTGACGGTC GCTTTGTATT TTTTGCCTCG
CGCGATGGTT GGATCAGTAA ATACGATATT TACAATCGCA AAACCGTCAG TGAAGTTCGC
GCTGCGATTA ATACACGCAA CATCGCTATC TCAAATGACG GTCAGTATCT AATTGTTGGT
AATTACTTGC CCAACAATGT TGTGATACTC AATACCGCTG ACCTATCCCC CCTTAAAGTG
ATTAACGCCA AAGACAGTAA CGGCAATAGC TCACGCGTCA GCGCCGTTTA TAATGCACCA
CCACGCCACA GCTTTATCGT CGCCTTAAAA GACGTAAAAG AAGTCTGGGA AATTCCTTAC
AGTGATGAGG GTGGCGTTGA AGTATATAAA GGTTGGGCAC ATGACTATAG AGTAGAAGCG
AAAGCGGAAG GTTGGAAGGC CGACTTATCT AAAAAAAGTG AGCAATTCCC AGTTCGCCGT
ATAAAAACCG ACGATTACTT GAATGACTTT TTCTTCGACC CTGATTACAT TAACTTAATT
GGTACTGCGC GTAATAGTCA CAATGGCCAA GTAATTAACC TAGACACTAA AAAGAAAATT
GCCTCTATCG GTTTAACTGG TATGCCACAT TTAGGCTCAG GTATAACCTG GAATTATCAA
GGTAAAGAAG TATTTGCTTC CCCCAATATC AAAGAAGGTA AAATTACCGT TATCGATATG
GAGAACTGGA ACATCATTAA AGAGATTAAA ACTGAAGGCC CAGGTTTCTT TATGCGCAGC
CACAGCAAGT CACGTTATGC ATGGACCGAC GTCTTTTTTG GCCCGAACAA TGACAAAGTA
CATGTTATTG ACAAGAGTAC ATTGAAAATA GTGAAGACCT TATCACCATC ACCGGGTAAA
AATGCCGCTC ATGTTGAGTT TACTAAAGAT GGTAAATTCG TACTGTTAAG CGTGTGGGAT
ATGGAGGGTG AACTCATTGT GTACGATGCC CAAACATTGG AAATAGTAAA ACGTATGCCG
ATGAAAAAAC CGTCAGGTAA ATACAATGTT TACAACAAAA TTAATTATGA ACGAGGCACA
AGTCATTAA
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| Protein sequence | MTKHPFLMSI SIALLCVFFA VNTANAAPAK KTTMSAAEKV AAKKLYQDNC QSCHGVDRLG
AMGPALLPEN LARFRKNKAI KVINTGRAAT QMPAFNKTLT ESEITSLANY IYTPSKASLS
WTVADINASK VQHFDQSKLP NEAQFDADLM NLFIVVELGD HSATLLNGDT FERLDRFKTR
FALHGGPKYS PDGRFVFFAS RDGWISKYDI YNRKTVSEVR AAINTRNIAI SNDGQYLIVG
NYLPNNVVIL NTADLSPLKV INAKDSNGNS SRVSAVYNAP PRHSFIVALK DVKEVWEIPY
SDEGGVEVYK GWAHDYRVEA KAEGWKADLS KKSEQFPVRR IKTDDYLNDF FFDPDYINLI
GTARNSHNGQ VINLDTKKKI ASIGLTGMPH LGSGITWNYQ GKEVFASPNI KEGKITVIDM
ENWNIIKEIK TEGPGFFMRS HSKSRYAWTD VFFGPNNDKV HVIDKSTLKI VKTLSPSPGK
NAAHVEFTKD GKFVLLSVWD MEGELIVYDA QTLEIVKRMP MKKPSGKYNV YNKINYERGT
SH
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