| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4223 |
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| Symbol | |
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| ID | 3520157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4446791 |
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| End bp | 4448032 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286664 |
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| Product | nirF protein |
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| Protein accession | YP_270873 |
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| Protein GI | 71279697 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAT CTTTATTAAA ACTAGCGAGC ATTGCAATAC TGTCTAGCGT GATTGCCGCT
TGCGCTAGTC AAACGTCTAA TGAAACAGCT CAAACACCAC TTCGCGCAAC AGGGGATATG
GGGGTTGTTA TTGAACGCGC CACTGGCCAA GTGCAAATTG TTAACCATAC CCATCAAGAA
GTGTTAGCAG AAATCGATGG TCTAGGTGAT TTATCTCACG CTTCTATTGT TTATTCACGT
GACCAACGCT ACGCCTATGT TTTTGGCCGT GATGGTGGTT TAACTAAAAT AGATATTCTT
AAAGACAAAA TTGCTAAACG CGTAATGCAG TCAGGTAATA GCATTGGCGG GGCAATTAGC
CAAGATGGTA AATTAGTTGC CGTTTCAAAC TACACACCTG GCGGCGTAAA AGTATTTAAT
AGTGAAACTC TTGAATTGGT TGCCACAATC GACAGCTCTA TTTTAACCAC TAAACCAAAA
AATAAAGATG GTAGTCCTGT ACGTTCTAAA GTAGTTGGCT TAGTGGATGC GCCAAACAAC
AAATTTGTTT TTAGCTTATT TGATAGTCAT GAAATTTGGA TTGCCGACTT CTCAACGATT
GAGCAAGATA AAACGCCTAA ATTAACCAAG TTTACGGATA TTGGCCTATT TCCTTATGAC
GCCTTAATTA GCCCTGATGG TCGCTATTAT ATAGCAGGTT TATTTGGTGA AGACGGCATG
GCGCTCGTTG ACTTATGGCA TATAGAAAAA GGTGTTAAAC GCATTTTACC CAATTACGGT
AAAGGCCAAC AGAAATTACC CGTGTACAAG ATGCCGCATT TAGAAGGTTG GGCAATCGCT
GGCGACTACG CTTTTATGCC TGCAGTGGGT CGACATGAAG TCTTAGTAGT AAACACTAAA
ACATGGGAAC AAGTAACTGC AATACCTGCG CATAGCCAAC CAATATTTGT TATGGCGCAG
CCTGATAACC GACAAATATG GGTTAACTTT GCCCACCCTG ACAACAACAC CATTCAGATA
TTTAATACCG AAACTTTTGA GCTAGTAAAA ACCTTAACGC CTGGTCCTGC TGTTTTGCAT
ATGGAATTTA CGCCACGTGG TGAACACGTA TGGATGTCAG TACGCGATAG CAATGAAATT
CAGATATACG ACACCAAAAC TCAAACGTTA CAAAAAACAC TCAAATCATC AAGCCCGAGC
GGTATTTTCT TTACCAGTCG CGCACACCAA ATAGGCTTAT AA
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| Protein sequence | MNTSLLKLAS IAILSSVIAA CASQTSNETA QTPLRATGDM GVVIERATGQ VQIVNHTHQE
VLAEIDGLGD LSHASIVYSR DQRYAYVFGR DGGLTKIDIL KDKIAKRVMQ SGNSIGGAIS
QDGKLVAVSN YTPGGVKVFN SETLELVATI DSSILTTKPK NKDGSPVRSK VVGLVDAPNN
KFVFSLFDSH EIWIADFSTI EQDKTPKLTK FTDIGLFPYD ALISPDGRYY IAGLFGEDGM
ALVDLWHIEK GVKRILPNYG KGQQKLPVYK MPHLEGWAIA GDYAFMPAVG RHEVLVVNTK
TWEQVTAIPA HSQPIFVMAQ PDNRQIWVNF AHPDNNTIQI FNTETFELVK TLTPGPAVLH
MEFTPRGEHV WMSVRDSNEI QIYDTKTQTL QKTLKSSSPS GIFFTSRAHQ IGL
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