| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4220 |
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| Symbol | nirS |
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| ID | 3519844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4443352 |
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| End bp | 4444980 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286661 |
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| Product | nitrite reductase |
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| Protein accession | YP_270870 |
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| Protein GI | 71279389 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0434848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG TAAAATATGG TCTTTCAGCA CTTGGACTTG CAATAGGTAT GGCTGCTACT
GGTGTTAGTA TGTCAGTATC AGCGGCAGAA CCAACTTTAG CTGAAGCTGA TTATGAAAAA
GCAAAACTAC AATACTTCCA ACGCTGTGCT GGTTGTCATG GTACTTTGCG TAAAGGCGCT
ACAGGCAAAA ACTTAGAGCC AAAAAGCACA ATGAAAAAAG GCCAAAAGCG TCTAGAGAAA
ATTATCGCTT TAGGTACTGA AGGCGGCATG AACAACTTTG ATGATTTGTT CACTAAGAAA
GAAATTGCCA ACATGGCAAC GTTCATTCAA ATGGAACCAC CTGTTCCACC AGAAATGTCT
TTAGAGCAAA TGCGTTCACA TACTAAAGAA TATGTTGCTC CGAAGGATTA CCCAACTAAA
CCAATGCACG GTTTAAACTG GAAAAACTTC TTTGTTGTTA TCGAACGTGA CGCAGGTACT
GCGGCAATCA TCGATGGCGA TACTAAAAAA ATCATCACTC ATATCGATAC AGGTTACGCA
GTACATGTAA TCAAAGGTAC TGAGCATCAT AAAGTTGACC ATGCAAAAGA TGTTGGTCGT
TTTTGGTACA CCATTGGTCG TGACGGTAAA GTTAACAAAA TCGATTTATG GCAAACACCT
GACAAAATGT TAGTTGCTGA AACTAAAATG GCTTATGACG CTCGTGATAT CGCTGTTTCT
GGTGACGGAA AATACGTAAT TGCTGGTGGT TACTGGCCTG CGCATTTCGT TATTATGGAT
GCTGTAACGT TAAACCCACT TAAAGTTGTC TCTACTCGTG GTTACAATAC TAAAGGTGAA
TTCATCAATG AAGCACGTGT AGCTGCAATT TACACTTCGC CGCTAACGTC TTCATTCATC
GTTGCTGTTA AAGAAACTGG TCAAATGTTA CAAGTTGATT ATACCGACTT AGAGAACTTA
ACCATTACTT CGATTGCTTC TTCTGAATTT TTACATGATG GTTTCTTTGA CCCATCAGGT
CGTTACTTCC AAATAGCAGC AAATGCTTCA AACCAAATGG TTGTTGTTGA TACTGTAGAA
CGTAAGTTAG AAGCGATTAT CGATGTTGAA AGCCTTCCAC ATCCTGGTCC AGGCGCTAAC
TGGATTGATA AAAAATGTGG CCCTGTTGGC GGTACAACTC ATTTAGGTAT GGGACTTGTA
TCTGTATGGG GTAACGATCC AATCGGTCAC CCTGCAGAAG CGTGGAAACT TTGTTATGAA
GTTGAAACAG ATGGTGCTGG TGCATTTATC CGTACTCACG AAACTTCACA ATACGTTTGG
GCTGATCAAC TTAAGCACCC TGAACCAGAA GTTCAACAGT CAGTGCAAGT ATTTGATAAA
GATACTCATG AAATTGTTAA AACTATCCGT GTAACAACTG AGCCAGGTAA AGCGGCTTTA
CACATGGAAT TTAACAACGA TGGCTCTGAA GTTTGGGTTT CAGTTTGGAA CCGTAAAGAT
GCTAAAAACC CAACAGGTGA AATTGTTGTT TATGATGCAA AAACTCTTAA AGAGTTACAC
CGCATTAAAG GCTTAACAAC GCCTACTGGT AAGTTTAACG TTCATAACCG TATGAACCAT
AAGACTTAG
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| Protein sequence | MKTVKYGLSA LGLAIGMAAT GVSMSVSAAE PTLAEADYEK AKLQYFQRCA GCHGTLRKGA
TGKNLEPKST MKKGQKRLEK IIALGTEGGM NNFDDLFTKK EIANMATFIQ MEPPVPPEMS
LEQMRSHTKE YVAPKDYPTK PMHGLNWKNF FVVIERDAGT AAIIDGDTKK IITHIDTGYA
VHVIKGTEHH KVDHAKDVGR FWYTIGRDGK VNKIDLWQTP DKMLVAETKM AYDARDIAVS
GDGKYVIAGG YWPAHFVIMD AVTLNPLKVV STRGYNTKGE FINEARVAAI YTSPLTSSFI
VAVKETGQML QVDYTDLENL TITSIASSEF LHDGFFDPSG RYFQIAANAS NQMVVVDTVE
RKLEAIIDVE SLPHPGPGAN WIDKKCGPVG GTTHLGMGLV SVWGNDPIGH PAEAWKLCYE
VETDGAGAFI RTHETSQYVW ADQLKHPEPE VQQSVQVFDK DTHEIVKTIR VTTEPGKAAL
HMEFNNDGSE VWVSVWNRKD AKNPTGEIVV YDAKTLKELH RIKGLTTPTG KFNVHNRMNH
KT
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