| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4212 |
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| Symbol | |
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| ID | 3521047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4433359 |
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| End bp | 4435050 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286653 |
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| Product | putative general secretion pathway protein A |
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| Protein accession | YP_270862 |
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| Protein GI | 71280580 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCGCA ATTTTTTCTC ATTAAGTGAA CTACCTTTTT CAATTTCCCC AGATCCTAAA
TATTTATTTA TGAGTGAAAG GCACAGGGAA GCATTGACAC ATTTAACTTA TGGATTAGGT
GAGGTGGGTG GTTTCGCATT ATTAACCGGA GAAGTAGGAA CGGGGAAAAC CACAATTAGC
CGTTGTTTAA TGGAGCAGTT ACCACAAAAC ACACAAGCTG CTTTTATTCT TAACCCGACC
TTGTCTTGCC AAGAGTTACT CGCCACTTTA TGTGATCAAT TAAAAATTCG TTACCGAAAA
ACAGGTGCTA GTTTAAAAAC CTTAACCGAT AAAATTTCTG AAAAACTGCT GAAAAACCAT
GAAAATGATA TCAATACATT ATTGATTATT GATGAAGCTC AGCATTTACA GCCCGAAGTG
TTAGAGCAAT TGCGTTTACT TACCAACTTA GAAACCAATA CTAAAAAGTT GTTACAGGTA
ATTCTAATAG GTCAGCCTGA ATTACAGCAA TTATTGCAAC GGCGTGATTT ACGCCAATTA
GCACAACGAA TAACGGCTAG ATATCATTTA ATGCCGTTAA CAAAAAACGA GCTAAGCCAA
TATATTCAGC ATCGTTTAAC GGTCGCAGAT TGCGCAAGAC CACTCTTTGA TAAAGGTGCG
TTAACTAAGA TTCATCAATT GTCTCAAGGT GTGCCAAGAT TGATTAACTT ACTGTGTCAT
AGCGCATTGA TGTTGGCGTA TAACCAAAAT GATAGTGTTG TTAATAAAAA AACGGTTGTT
GCAGCAGCAG ACCGTGCATT AGGAGAAGAC GTAACCCGCA AGCAGGGGCG AGTTAATTAT
AATGGTGTCA TGCTGTTTTC TACTGTTTTA AGCATCGCTG CTTTCTTTAC TTTAGCTGGC
TTTTGGTGGG GACAAACACC CGTTAAAGAT GTCGTGGAAA TGAGTAATCA AGAAAATGTA
ATCAGCACCG AAGAACATCT AAACGGTACT GAATTGGCAA AGGTTGTCGA AAATAGTGAA
CAAAAACTGC TGTCAGATGA GGGTAAGGTT CAATCAGAGC AAGCTAGAGC CGATATCAAT
AACAAAACAC CTAAAACTAG AATAGACAAT TCATCGCCAA ATACCGCACT TGTTAGCGTT
AAAAAATTGA GCAAGATCGA AGCCGAGCGC AAATCGAATA ATTCACAGGT AATTGAAAAT
AAAATTTATG AGCCTATTAG GGAAGAAACT CTGCTAGTTA GCGGTGAAAA GAATGACTTG
CCTCATGAAA ATAAGCAGGA TACTAATTAT AAAGTTACTG AAGTTGAAGG TGTTTCTAGT
GATTTATTAG CCCGATTTCA AGCCGCAATA GATGAAACTA ACGTAGGAGA CTCACCTAGA
GAACAGTCAG GTGATAATCG TTTAGAAAAC AGCAGTAATG CTTATGAGTC GTTTATCAAC
CCTAATGAAG AGATTTCTGT TAGGCCACTC ACTCAAATGC CACAACAGCT ACAAAATGCT
TTACCAAGTT TAGAGTTTGA ACAGCACATT TATGCTTCTG ACGGTCAGGG TTGGATAAAG
GTTAATGGTC GAGATCGTTA TGAAGGTGAC TACATAGGTG ATAATTTGAT AGTTGAGAAA
ATATTACCTC AACAAGTCAT TCTCTCTTTT CAAGGTGAAA AATTCAGTTT ACCGGCGCTT
ACAAATTGGT AG
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| Protein sequence | MYRNFFSLSE LPFSISPDPK YLFMSERHRE ALTHLTYGLG EVGGFALLTG EVGTGKTTIS
RCLMEQLPQN TQAAFILNPT LSCQELLATL CDQLKIRYRK TGASLKTLTD KISEKLLKNH
ENDINTLLII DEAQHLQPEV LEQLRLLTNL ETNTKKLLQV ILIGQPELQQ LLQRRDLRQL
AQRITARYHL MPLTKNELSQ YIQHRLTVAD CARPLFDKGA LTKIHQLSQG VPRLINLLCH
SALMLAYNQN DSVVNKKTVV AAADRALGED VTRKQGRVNY NGVMLFSTVL SIAAFFTLAG
FWWGQTPVKD VVEMSNQENV ISTEEHLNGT ELAKVVENSE QKLLSDEGKV QSEQARADIN
NKTPKTRIDN SSPNTALVSV KKLSKIEAER KSNNSQVIEN KIYEPIREET LLVSGEKNDL
PHENKQDTNY KVTEVEGVSS DLLARFQAAI DETNVGDSPR EQSGDNRLEN SSNAYESFIN
PNEEISVRPL TQMPQQLQNA LPSLEFEQHI YASDGQGWIK VNGRDRYEGD YIGDNLIVEK
ILPQQVILSF QGEKFSLPAL TNW
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