Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4201 |
Symbol | |
ID | 3521454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4422083 |
End bp | 4423255 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637286643 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_270852 |
Protein GI | 71280985 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.437821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATT ATTCTCTGGC AAGCAGTACA TGGGATGAGC GTGAATTTGG CGCAATTCAA AAAGTAATAG ATTCAGACAT GTTTACTATG GGTAAGCACG TTGCACAATA CGAAAAAAAC TTTGCTGATT TTTTCGGTTC AAAATATTCA GTTATGGTGA GTTCTGGCTC TACCGCTAAC TTATTAATGA TAGCCTCACT ATTTTTTACT AAGAATCCTG CGCTTAAATT ACAACGTGGT GACGAAATTA TTGTCCCCGT AGTTTCATGG TCAACTACTT ATTTCCCACT ACAACAATAT GGGCTAAAAG TTAAGTTTGT CGATATTGAC CGCAAAACAC TCAATATCGA CTTAGAAAAA CTAGCAGCAG CAATTACTGA CAAAACTAAA GCGATACTGT CGGTAAACTT ACTCGGTAAT CCAAATGACT ACGCCAAAAT GAATGATATT ATTGGCGACC GCGACATTTT TATTCTCGAA GATAACTGTG AGTCTATGGG CGCCACGATA GCGGGTAAAC AAGCAGGGAC TTTTGGAGTT ATGGGCACAT TTAGCTCATT TTTTTCGCAT CATATCGCCA CGATGGAAGG TGGTTGTATT GTTACTGATG ACGAAGAGCT TTATCATATA TTACTCTGTA TTCGTGCTCA TGGATGGACC AGAAACTTAC CTAAATTTAA TAAAGTGAGT GGTGAAAAAA GTGATGATCC CTTTGAAGAG TCATTCAAAT TTATGTTACC CGGTTACAAT GCTAGGCCTT TAGAAATGAG TGGTGCATTA GGTATTGAAC AGCTTAAAAA ACTACCTAGT TTTATTGATA TCCGACAAAA AAATGCACGT TTATTTCAAG ACTTGTTTGC TAATCATGCC TACATAGAAA TTCAACAAGA AATCGGCAAA AGTAGTTGGT TTGGTTTTTC TTTAGTGCTG AAAGAAAATG CACCGTACAG CCGAGCAGAA TTAGTAAAAT TATTAACTGA AAATGGTATT GAATGCCGTC CCATTGTAAC GGGAAATTTT CTAAAGAATA CTCAGGTTCT AGAGTATTTT GATTATGAAG TGTCAGGCAC CGTAGAAGTA GCAGAATATA TCGACCAACA TGGTTTATTT GTTGGTAATC ATCAAAATGA TATTGAAAAA GAAATTAAAC TGCTCGCTAA GGTATTGTTA TAA
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Protein sequence | MTNYSLASST WDEREFGAIQ KVIDSDMFTM GKHVAQYEKN FADFFGSKYS VMVSSGSTAN LLMIASLFFT KNPALKLQRG DEIIVPVVSW STTYFPLQQY GLKVKFVDID RKTLNIDLEK LAAAITDKTK AILSVNLLGN PNDYAKMNDI IGDRDIFILE DNCESMGATI AGKQAGTFGV MGTFSSFFSH HIATMEGGCI VTDDEELYHI LLCIRAHGWT RNLPKFNKVS GEKSDDPFEE SFKFMLPGYN ARPLEMSGAL GIEQLKKLPS FIDIRQKNAR LFQDLFANHA YIEIQQEIGK SSWFGFSLVL KENAPYSRAE LVKLLTENGI ECRPIVTGNF LKNTQVLEYF DYEVSGTVEV AEYIDQHGLF VGNHQNDIEK EIKLLAKVLL
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