Gene CPS_4201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4201 
Symbol 
ID3521454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4422083 
End bp4423255 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content36% 
IMG OID637286643 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_270852 
Protein GI71280985 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.437821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATT ATTCTCTGGC AAGCAGTACA TGGGATGAGC GTGAATTTGG CGCAATTCAA 
AAAGTAATAG ATTCAGACAT GTTTACTATG GGTAAGCACG TTGCACAATA CGAAAAAAAC
TTTGCTGATT TTTTCGGTTC AAAATATTCA GTTATGGTGA GTTCTGGCTC TACCGCTAAC
TTATTAATGA TAGCCTCACT ATTTTTTACT AAGAATCCTG CGCTTAAATT ACAACGTGGT
GACGAAATTA TTGTCCCCGT AGTTTCATGG TCAACTACTT ATTTCCCACT ACAACAATAT
GGGCTAAAAG TTAAGTTTGT CGATATTGAC CGCAAAACAC TCAATATCGA CTTAGAAAAA
CTAGCAGCAG CAATTACTGA CAAAACTAAA GCGATACTGT CGGTAAACTT ACTCGGTAAT
CCAAATGACT ACGCCAAAAT GAATGATATT ATTGGCGACC GCGACATTTT TATTCTCGAA
GATAACTGTG AGTCTATGGG CGCCACGATA GCGGGTAAAC AAGCAGGGAC TTTTGGAGTT
ATGGGCACAT TTAGCTCATT TTTTTCGCAT CATATCGCCA CGATGGAAGG TGGTTGTATT
GTTACTGATG ACGAAGAGCT TTATCATATA TTACTCTGTA TTCGTGCTCA TGGATGGACC
AGAAACTTAC CTAAATTTAA TAAAGTGAGT GGTGAAAAAA GTGATGATCC CTTTGAAGAG
TCATTCAAAT TTATGTTACC CGGTTACAAT GCTAGGCCTT TAGAAATGAG TGGTGCATTA
GGTATTGAAC AGCTTAAAAA ACTACCTAGT TTTATTGATA TCCGACAAAA AAATGCACGT
TTATTTCAAG ACTTGTTTGC TAATCATGCC TACATAGAAA TTCAACAAGA AATCGGCAAA
AGTAGTTGGT TTGGTTTTTC TTTAGTGCTG AAAGAAAATG CACCGTACAG CCGAGCAGAA
TTAGTAAAAT TATTAACTGA AAATGGTATT GAATGCCGTC CCATTGTAAC GGGAAATTTT
CTAAAGAATA CTCAGGTTCT AGAGTATTTT GATTATGAAG TGTCAGGCAC CGTAGAAGTA
GCAGAATATA TCGACCAACA TGGTTTATTT GTTGGTAATC ATCAAAATGA TATTGAAAAA
GAAATTAAAC TGCTCGCTAA GGTATTGTTA TAA
 
Protein sequence
MTNYSLASST WDEREFGAIQ KVIDSDMFTM GKHVAQYEKN FADFFGSKYS VMVSSGSTAN 
LLMIASLFFT KNPALKLQRG DEIIVPVVSW STTYFPLQQY GLKVKFVDID RKTLNIDLEK
LAAAITDKTK AILSVNLLGN PNDYAKMNDI IGDRDIFILE DNCESMGATI AGKQAGTFGV
MGTFSSFFSH HIATMEGGCI VTDDEELYHI LLCIRAHGWT RNLPKFNKVS GEKSDDPFEE
SFKFMLPGYN ARPLEMSGAL GIEQLKKLPS FIDIRQKNAR LFQDLFANHA YIEIQQEIGK
SSWFGFSLVL KENAPYSRAE LVKLLTENGI ECRPIVTGNF LKNTQVLEYF DYEVSGTVEV
AEYIDQHGLF VGNHQNDIEK EIKLLAKVLL