| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4171 |
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| Symbol | parC |
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| ID | 3518414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4387770 |
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| End bp | 4390079 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286613 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_270822 |
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| Protein GI | 71277810 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATG CGCTCGAATA TAGCCTTGAT GGAGTAGAAC AGGTCCCATT AAGACGTTTT
ACTGAAGAAG CTTATTTAAA CTATTCCATG TACGTAATTA TGGACCGTGC TTTGCCACAT
ATTGGTGATG GCTTAAAGCC CGTGCAAAGA CGCATAGTTT ATGCAATGTC AGAGCTTGGT
TTGTCTGCGA CTGCTAAATA TAAAAAATCA GCCCGTACTG TTGGTGACGT ATTAGGTAAA
TTTCATCCCC ATGGTGATAG TGCTTGTTAT GAAGCTATGG TATTGATGGC GCAACCTTTT
TCTTATCGAT ATCCTTTGGT GGACGGGCAA GGAAACTGGG GAGCACCCGA TGATCCTAAA
TCGTTTGCCG CAATGCGTTA TACCGAGTCG AGATTATCAC GTTTTAGTGA AGTATTACTT
GCTGAACTAG GGCAAGGCAC TGTTGATTGG CAGCCAAATT TTGATGGCAC CATGCAAGAG
CCAAAAACAC TGCCTGCGCG TTTACCTCAT ATTTTACTCA ACGGTATTAC GGGCATTGCC
GTCGGTATGG CAACGGATAT TCCACCACAC AATGTGCGTG AAGTTGCTGA TGCTTGTGTG
CATTTAATTG AAAATCCTAA AGCAGAAGTG AGTGACTTAC TTGAGTTTGT TAAAGGGCCT
GATTATCCTA CAGATGCTGA GATTATTACC CCGAAAGCCG AAATTGAAAA AATATACCAA
ACAGGGCGTG GTAGCATAAG AATGCGCGCT GTTTATGATG TAGAACAGGG TGATATTGTC
ATTACCTCAC TTCCTCATCA AGCCTCGGGT GGTAAAATAT TAGAGCAAAT TGCGGGACAA
ATGACAGCGA AAAAACTGCC TATGGTAGTC GACCTTCGTG ATGAATCTGA TCATGAAAAT
CCTGTACGTC TTGTCATTAT TCCGCGTTCA AACCGTGTTG ATGTTGAACA ATTAATGCAA
CATTTATTTG CCAGTACCGA TTTAGAAAAA AGTTATCGCG TTAACATCAA TATGATAGGT
TTAGATAACC GTCCTGCAGT GAAGAACTTG CTGGTCATTT TATCTGAATG GCTTGAATAC
CGTCGTGAAA CAGTACGCCG TCGTCTGCAA TATCGTTTAG ATAAAGTATT GGCGCGCTTG
CATATTCTTG ATGGTTTGTT GGTCGCTTAC CTAAATATTG ATGAAGTCAT TGAAATCATC
CGTGGCTATG ATGATCCAAA AGCAGAGTTA ATGTCTCGCT TTGCCTTATC GGACACTCAA
GCTCATTCAA TTTTAGAGAT TAAATTACGT CAACTGGCCA AGCTCGAAGA AATAAAAATT
CGTGCCGAGC AAGATGAACT TCGTATAGAA CAAGATTATT TAGAGAAGAT CCTTAATTCA
AAAGCACGCA TGAGCACGCT GATGAAAAAA GAGATCCTTG CTGCAGCAGA ACAGTATGGT
GATGATCGCC GCTCTCAATT AGTTGAACGT AGCGAATCAA AAGCACTTAC CGAAAAAGAT
TTAGTACCAA GTGAGGCGGT AACCGTTGTC GTTTCTGATA AAGGTTGGGC CCGCTGTGCT
AAAGGTCATG ATATTGATCC TACCAGCTTA AGTTATAAAG CGGGTGATGG TTATTTGTGT
GCTTCAAAAG GGCGAAGTAA TCGCCCTGTG GTATTTATAG GTTCTGATGG TCGTGCTTTT
ACTACTGACG CGCATACCTT ACCAACAGCA CGCTCTCAAG GTGAACCATT AACGGGACGC
TTTAACCTTT CAACAGGGAA AACCTTCGTC CATAGCATAA TGTCGGATGA CGATGCTCAA
TATCTGCTAG TCAGTGATGC CGGTTATGGC TTTGTTAGTA GTTTTGGCGA TATGGTTAGT
CGAAATAAAA ATGGTAAAGC ATTAATTAGC TTACCTGAAG CCGCTAAAGT GTTGATGCCG
CAATGCATCA ACAATATTGA AAATGATAAC TGCCTCACTA TTACTAGCGA AGGGCGTATG
TTGGTTTTTC CGGTTAAAAA CTTACCAGTA CTCAGTAAAG GTAAGGGTAA TAAGATTATC
AATATCCCTT CTGCACGATC AAAGTTACGT GAGGAATTTG TTAGTTTACT TTGTATCATC
CCAGAAGGCG CGGCAATTAC TCTGCATGCA GGCAAACGCA AGCTTACGCT AAAAGCGGCA
GATATCGAGC ACTATAAAGG TGAGCGTGGT CGTCGTGGCA ATAAACTACC TAGAGGTTTA
CAACGCGTGT CAGCAGTAGA AATTGAATCG GGTTCTGTGA CTAACTCTGA TGAGCAAAGT
GAAAATGAAG AGCCTAAAGC GAGCGAGTAA
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| Protein sequence | MSDALEYSLD GVEQVPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIVYAMSELG
LSATAKYKKS ARTVGDVLGK FHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTES RLSRFSEVLL AELGQGTVDW QPNFDGTMQE PKTLPARLPH ILLNGITGIA
VGMATDIPPH NVREVADACV HLIENPKAEV SDLLEFVKGP DYPTDAEIIT PKAEIEKIYQ
TGRGSIRMRA VYDVEQGDIV ITSLPHQASG GKILEQIAGQ MTAKKLPMVV DLRDESDHEN
PVRLVIIPRS NRVDVEQLMQ HLFASTDLEK SYRVNINMIG LDNRPAVKNL LVILSEWLEY
RRETVRRRLQ YRLDKVLARL HILDGLLVAY LNIDEVIEII RGYDDPKAEL MSRFALSDTQ
AHSILEIKLR QLAKLEEIKI RAEQDELRIE QDYLEKILNS KARMSTLMKK EILAAAEQYG
DDRRSQLVER SESKALTEKD LVPSEAVTVV VSDKGWARCA KGHDIDPTSL SYKAGDGYLC
ASKGRSNRPV VFIGSDGRAF TTDAHTLPTA RSQGEPLTGR FNLSTGKTFV HSIMSDDDAQ
YLLVSDAGYG FVSSFGDMVS RNKNGKALIS LPEAAKVLMP QCINNIENDN CLTITSEGRM
LVFPVKNLPV LSKGKGNKII NIPSARSKLR EEFVSLLCII PEGAAITLHA GKRKLTLKAA
DIEHYKGERG RRGNKLPRGL QRVSAVEIES GSVTNSDEQS ENEEPKASE
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