| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4165 |
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| Symbol | |
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| ID | 3522010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4375186 |
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| End bp | 4380237 |
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| Gene Length | 5052 bp |
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| Protein Length | 1683 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286608 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | YP_270817 |
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| Protein GI | 71281538 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.418603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAC TAAACAAGTC TTCATTCATC GTATTTTTCT TTCTACAGTC CTTCTTCCTA
CAAAATGGAA TGGCAGAAAA CTTACCTACC GACTTAGTGA CTTGGGCTCA CGCAAATCCT
GTTGTTCATA TTGGTGTTGA TGGCACTTTC CCACCCTTTG ACTATATCGA CGAACAAGGG
GTTACTGCTG GTGCAGGCAA GCTCATTCGT CAACAATTAT CAGCAATACT CCCGGTCGAT
TTACAAGAGA CCTCAGTATC AGATTTTCGG CTTGAATATG ATGATATGTT GCGTGGCAAT
ATTGATGCAA TTTCAGTGTG CGGCAATATT GAACAACGAA GAGATGAGGT TTTATTTACT
AAACCCTTTT TGCAAATGAC ACCTATCGTG GTGGTTAATA AAAATAGTGA TATTAAAAGT
GAAATGGATA TCACCTCTGA ATTAAAAATT GCCTCAATTG CAGGATATGC CGATGCTAAT
TTCGCAAAAC AATTATCAGT CAATTCAAAA GGGTTAAGTA GTAACCTCCA AGGCTATCAA
AGCATAGAGA GCGGTAAATA TGATGTATTT ATCACTTATT TATACCTTTA TAAATATATG
CTTAAAAAGC ATGATTTTAA AAATATTAAA CCCATCGCAA TCAGTCAATT TGAAAGTTTA
CCTATTGGTT TTTGTGTTAA TAAAAACAAA CCACAATTAG TGGGGTTATT AAATTGGGGA
ATAGATCAAT TAGGTGATGA TTTTATACTT GCGATGCAAA GTAAGTGGGC AGAATCTAGC
CTCGATGAAG GTCAAAACAG TAGAGCACAT ATAGATAAGA GTATTAGTTT AACGAGCGTC
TTTATCTATG CTGTAATCTT TGTTTTACTC GCGTTGTTTT TTGCGCGAAA ATTTGCCAGT
ACCATTGCGA TAAAACTGGA TACGTTAGCC TTTAGGACGA CCTATTTCAC TGTACTTATC
CTTATTATCT CCTTGTCCAC CGGCGGTATT TACTTGTTCC TGAATGACTT TAAGGATCAG
TTACTTATTG ATCAAAAAGA AACGTTTAAT GTTACAAGAG ATGTTACTAA AAAAACATTG
GCGGGTTGGT ACCGTGAACG TGAATTATTG GCACATAACA TTGCTAAATC TAAAAGCTTT
AAACGGTTAG TTAATCAGCT GGTTATCGCT AGTGAAATAG ATGACACGAT TAAGCTTGCC
CAAGCCAAAA AAGCATTGAG GGTGTACTTT AGTAAGCGAC CTTACACTAC ACAAGGAGGA
AGAGCTTATA CCATCACTGA TGTTCAAGGG CGATATCTAT TAAATCTTGT GCAAAGTGCT
GAAGGAAAAA AATCCCCGAT AATTAGCCAG CGTCCTGAAT TATTTAATGA AGTCCTCATG
GGACGTACAG AGTTCATTCC TCCTGTTTGG GCAAATGTAA ATATTGACGG AAATAGAAAT
GCAGAGGATA AAGATGCTGA AGTTTTTATT GCCACACCTG TTCGCAACGA ACAGCAGGAG
ATTATTGCCG TATTAGGTTT TCGGTTCGAT CCTGACAGAG AGTTTTCGCA ATTATTTATT
GATGGCCGAC TAGGTAAAAG CTTCGAGAGT TTTGCAGTAG ACTCTAGAGG TTATATGATT
TCAAGTAGTC GTTTTACCTC AGAGTTACAA CAAAAAGGCA TTGTGCCTGC CGGCGAGAGC
ACTGTGCTTA ATGTTCGCTT GCAAAACCCT GAAACTAATC CGATAGTGCA AGCCGCAAAG
TTTAAGCTCA ACGGACAAAA CTTGCATGGC TATACCAATT ACCGAGGAAA AACTGTTGTT
GGGCAATGGA TCTCATTAAA AAATTCGAAT ATTACCGTAG TCAGTGAAAT TGAACTCAGC
GAAATGCTGG CTGAGTATTA CGATGTCAGA AATCTACTAC TGATAGGACT CATTATTTCA
AGTGCCTTTA TTCTCTCTAT TTCTATTTTT ATGATCACTA TTTCCAATAG GGCGAATGAT
ATTAGTCGAC GGTCTCAGCA AGAATTAGCA GAGCAAGTTA CTATTCGAAC GAAAGAATTG
GCGGCATCAG AACAAAAAAG CAAACTGATT AATAGCTCTG TCGCTGATGG TATTTTAGGT
GTAGATAAAC TTGGTCACTT TATTTTTGCC AATGAATCTG CCACAAAAAT AACGGGATAT
AGCGAAGAGC AGATTCTTTC AAGTGATCTT ATTTCACTGT TTGCTGGAGA TAATAAAGAA
AATTTAACTT TTGAAGACAC AGAAGTTTAT AAGGCAATTC AAAGCAAGGA AGTCATCCGT
ATTAGCAATG AATATGTATT AATGAGCGGA GCGAGAGAAC TTCCTCTTGA ATATAGCATT
TCACCTGTTG AAGACGATGA GTCAGAATTA GCCTGTGTGA TTGCACTACA AGATATCACC
TTACGTGTAC AAGAGACTGA ACGTCTCGAA AAAATGCTAG AGCATTTACC AGTTTGTATG
GTCATCATGA ATCAAAATGA TGAAGTAGAA CAGATTAACC AAACGGGCAT TGAATTACTT
GGTTTTGAAA GAGATGAAAT TGTAGGTAAT CCGGTAGATT TATTTATTCC TCAAGAACAA
GTAGAGAGTC ATAAAGCTTT ACTTAAAAAG TTCTTTCAAG AAGAAACGGT CATCGATACT
AGAAGTTTAG AACGAGATTT TAAAGTTAAG CATAAATCAG GCAAGCTTAT TGAAATTCAG
GCGGTGTATA CGCCTGTTCA TTTTCACAAT GGTTTGTATG CGGCGGTAAT GGTGCGTGAT
ATCACCTTAG ATAGACAAGC TGAATTTGCA CTGTTAGAAG CAAAACGTAT CTCTGATGAT
GCTTCAAAAG CAAAGTCCGA CTTTTTAGCG AACATGAGTC ATGAAATTCG TACGCCGATG
AATGCCATTA TGGGCATGTC TCATTTAGCA TTGGGGTGTG AGTTAGACAG AAAGCCAAAG
AATTACGTGA CCAAAGTTTA TAAAGCGGCA GAATCCTTAT TAGGGATTAT TAATGACATC
CTTGATTTCT CGAAAATTGA GGCGGGTAAG TTAGATATTG AGGTTATTGA GTTCAGTTTG
CATGATACCT TTGCAGACCT AGCTAATATT ATTGGCTTAA AAGCTGGAGA GAAAAACTTA
GAGCTGTTGT TTGATATCTC TCCAGATGTC CCAGTCAACC TTAAGGGGGA TCCCTTAAGG
TTGAATCAAA TCCTGATAAA TTTAGCCGGA AATGCGGTTA AGTTTACCGA GCAGGGACAG
GTGGTTATTT CAGTCAACGT AGTGACTAAC GTTAGCACAA GTCATTGTGA TGATATTAAC
TTGGAGTTTT CAGTAAAAGA CTCCGGGATA GGTATGGATG ATGAACAACA GAAAAAGCTA
TTTCAATCCT TTAGTCAGGC TGATAGCTCA ACCACCCGAA AGTACGGTGG TACTGGTTTA
GGGTTAACTA TTTCTAAAAA ATTAGTAGAG TTAATGAATG GCCAGATATG GCTAGAAAGT
AAAGCGGGTG AGGGCAGTTG TTTTTCTTTT ACCACCACAC TACAAGTGTC TGATGTCATT
GATAATAGGC TTGTTGAGCA GCAAAAGTCT TTTCTAGCAG ATAAACGTAT TCTTATTGTT
GATGACAATT TGCTCGCATT GGATGTACTT AGCTCTATTT TAAAATCCTT TCATTGTCAT
GTGGTTGCTG CTAATAGCGG GGAAGAAGCA ATTGAACTCG TTAAGCAAGC AACACTGACG
TTTGATTTCA TTATGCTTGA TTGGAATATG CCTGATTTAG ATGGCATTGA AACCTATCAC
ATCATTAAGT CACAAAATAA TTATCAAGAT AACCAATTTA TTTTAGTAAC GTCTAATGCC
AATGATAATG AGGCGGTTGA CCAGCTCAAA AAGCGTATCA ATAGCGTATT GGTTAAACCT
GTCACTTCTT CGAGTATTTT TGATGAAATG ATGCGCCTTA ATGGTGATGA GGCATACAGC
AATACTCGGG AAATGAAACG AGACGATGAG CTTATTCAAA ATCAGCAACA TTTAAGCGGC
GCGAAAATAT TATTAGTAGA AGATAATGAG TTGAATCAAG AACTAGCACT TGAATTATTG
AAGCAATCTA ACATTGATGT TGAGTTAGCT GAAAATGGTG CCATCGCGGT AGAAAAATTC
TCTAGCAGGC ACTTTGACGG AATTTTAATG GATTTACAAA TGCCGGTAAT GGATGGGTTT
ACTGCAACAA AAATTATTAG AGAAAGTGAT TCTTCAATTC CTATTATTGC CATGACAGCT
AATGCTATGG TGAGTGATAA AGAAAAAGTT TTAGCTTCAG GAATGAATGA TCACATCACC
AAACCTATTA ATGTAAACAC CATGTTTGCC ACCATTGCAA AGTGGGTTTC ACCGTCGATT
AAGCTTGACC ATGACATTGA TAAGGCTAAA TTAAGTGTTT ACACCTTACC TGAAAAGGTT
ATATCAATAC CTGATTTTAA TACTATTAAT ACCAGTGCTG GTTTAGCGGT GGCTAATGGT
AATAAATCAT TATATGTTAA ATTACTAGGT CGATTTGTTA GTGGACAAGA CGACTTTGTA
GAACGTTTTA AAGTCGCTAT GTTAAAACAA GATAAAGAGG AAGTTACCCG TTTTGCTCAT
ACCTTAAAAG GAAGTGCCGG TAATATCGGT GCTAACGCTT TACAGGGATA TGCCGATCAA
TTGGAACTGG TTTGTGCAAA TGATGCTAAT ACAGATGAGT TAGTTAATTT ACTTGACCAA
GTCACTGAAG AGTTAACGCT GGTCTTAAAT GAATTAACTG AGTATTTAGC TAAAGAAAAT
AGTGTTGAAA GTACTGCACC CATTAATGAT TTTAACTTTA ATGAAGAGTT TACGGTGCAA
TTAGCTCAGT TACTTGAGCT AATTGAAAAT TTTGAAACAG AATCAATTGA ACTCGCTGAA
GATATTTTAA ATCAATTAAA GGGCACTAAA CAAGAAGCCT TATTTGAGAA AATTTATCAG
CAAATAGAAA GTTATGAATT TACTGAAGCG GAAACCGCTT TGAATGAATT CATCGATGTA
CTAAATAACT AA
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| Protein sequence | MIKLNKSSFI VFFFLQSFFL QNGMAENLPT DLVTWAHANP VVHIGVDGTF PPFDYIDEQG
VTAGAGKLIR QQLSAILPVD LQETSVSDFR LEYDDMLRGN IDAISVCGNI EQRRDEVLFT
KPFLQMTPIV VVNKNSDIKS EMDITSELKI ASIAGYADAN FAKQLSVNSK GLSSNLQGYQ
SIESGKYDVF ITYLYLYKYM LKKHDFKNIK PIAISQFESL PIGFCVNKNK PQLVGLLNWG
IDQLGDDFIL AMQSKWAESS LDEGQNSRAH IDKSISLTSV FIYAVIFVLL ALFFARKFAS
TIAIKLDTLA FRTTYFTVLI LIISLSTGGI YLFLNDFKDQ LLIDQKETFN VTRDVTKKTL
AGWYRERELL AHNIAKSKSF KRLVNQLVIA SEIDDTIKLA QAKKALRVYF SKRPYTTQGG
RAYTITDVQG RYLLNLVQSA EGKKSPIISQ RPELFNEVLM GRTEFIPPVW ANVNIDGNRN
AEDKDAEVFI ATPVRNEQQE IIAVLGFRFD PDREFSQLFI DGRLGKSFES FAVDSRGYMI
SSSRFTSELQ QKGIVPAGES TVLNVRLQNP ETNPIVQAAK FKLNGQNLHG YTNYRGKTVV
GQWISLKNSN ITVVSEIELS EMLAEYYDVR NLLLIGLIIS SAFILSISIF MITISNRAND
ISRRSQQELA EQVTIRTKEL AASEQKSKLI NSSVADGILG VDKLGHFIFA NESATKITGY
SEEQILSSDL ISLFAGDNKE NLTFEDTEVY KAIQSKEVIR ISNEYVLMSG ARELPLEYSI
SPVEDDESEL ACVIALQDIT LRVQETERLE KMLEHLPVCM VIMNQNDEVE QINQTGIELL
GFERDEIVGN PVDLFIPQEQ VESHKALLKK FFQEETVIDT RSLERDFKVK HKSGKLIEIQ
AVYTPVHFHN GLYAAVMVRD ITLDRQAEFA LLEAKRISDD ASKAKSDFLA NMSHEIRTPM
NAIMGMSHLA LGCELDRKPK NYVTKVYKAA ESLLGIINDI LDFSKIEAGK LDIEVIEFSL
HDTFADLANI IGLKAGEKNL ELLFDISPDV PVNLKGDPLR LNQILINLAG NAVKFTEQGQ
VVISVNVVTN VSTSHCDDIN LEFSVKDSGI GMDDEQQKKL FQSFSQADSS TTRKYGGTGL
GLTISKKLVE LMNGQIWLES KAGEGSCFSF TTTLQVSDVI DNRLVEQQKS FLADKRILIV
DDNLLALDVL SSILKSFHCH VVAANSGEEA IELVKQATLT FDFIMLDWNM PDLDGIETYH
IIKSQNNYQD NQFILVTSNA NDNEAVDQLK KRINSVLVKP VTSSSIFDEM MRLNGDEAYS
NTREMKRDDE LIQNQQHLSG AKILLVEDNE LNQELALELL KQSNIDVELA ENGAIAVEKF
SSRHFDGILM DLQMPVMDGF TATKIIRESD SSIPIIAMTA NAMVSDKEKV LASGMNDHIT
KPINVNTMFA TIAKWVSPSI KLDHDIDKAK LSVYTLPEKV ISIPDFNTIN TSAGLAVANG
NKSLYVKLLG RFVSGQDDFV ERFKVAMLKQ DKEEVTRFAH TLKGSAGNIG ANALQGYADQ
LELVCANDAN TDELVNLLDQ VTEELTLVLN ELTEYLAKEN SVESTAPIND FNFNEEFTVQ
LAQLLELIEN FETESIELAE DILNQLKGTK QEALFEKIYQ QIESYEFTEA ETALNEFIDV
LNN
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