Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4143 |
Symbol | |
ID | 3518754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4358942 |
End bp | 4359991 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286586 |
Product | trypsin family protein |
Protein accession | YP_270797 |
Protein GI | 71278654 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.483175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGAG CTCTTCTATT TCTTAGTATT TTCTTCTTAA GTGGCTGTGG AACACCAATC CAAGCATTTC AAGTCAAAGA AAATTCAATT CAAACACTAT ATAAGAAGGT CAACCCTTCA GTGGTTGAAT TACATGTACA ATCACTAGCT GATCCAAAAA TTGGTCAAGT AGCATATAAA GCAAAAACTG CAAATTCATT AGGGTCAGGA GCTTTAGTAA GTAGCGAAGG TCGTATTTTA ACAGCAGCTC ATGTTGTTGA TAAAGCAACA GCAATTGAAG TTGAATTTGC TGATGGCACT AAAACTACCG GTCATGTTGT TTGGGTAGAG CCGCTTATTG ATTTGGCGAT GATTCAGGCT GGGGAAGTTC CTAGCACAGC TAAACCATTA AAATTAGCTA AAAGTAACGA TTATCAAATT GGTGAACAAG TTATTATTAT TGGTGCACCT TTTGGTGTTA GCCACAGTTT ATCTGTTGGC TATCTAAGTG GTATTCGTGA CGGTAACGCA ATACCGGGCA GAACCTTAGT GCCACGTTTA TTACAAACTG ATGCTTCAAT TAACCAAGGT AATTCTGGCG GTCCAATGTT TAACCTCAAT GGTGAAATTG TTGGTATTGT TAGCCATATA TTATCTAAAA GTGGTGGCAG CAATGGCTTA GGTTTTGTTG TTTCAGTTGA TACCGTACGC CATATAATTG ATAGTGACCC AGGTACATTC TCGGGTTTTA TTCCATTGTT ACTTAATAAA AAACAGTCGT ATGCTATTAA CAATACAGCA GGCCACGGCA TGTTAATTCA GCATGTTATA CCAGGTACTT TAGCAGATAA ATTAGGCTTT AAAGGTGGTA ACCTTAGTGT TGTCATTGGT CGCAGTCCTA TTTTACTTGG TGGTGACATA CTGCTGGAAG TGGGCGGTCG TGCTATTATT GATTTGGCAT CAGCGGTTCA AATTAAGAAG CATCTAGCTA CCTTTGAAAA AGGCGATAGA GTTACTTTTA AATATTTACG CAATGGTCAA AAGAAAGAAA CTTATTGGAT AGTTGAGTAG
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Protein sequence | MSRALLFLSI FFLSGCGTPI QAFQVKENSI QTLYKKVNPS VVELHVQSLA DPKIGQVAYK AKTANSLGSG ALVSSEGRIL TAAHVVDKAT AIEVEFADGT KTTGHVVWVE PLIDLAMIQA GEVPSTAKPL KLAKSNDYQI GEQVIIIGAP FGVSHSLSVG YLSGIRDGNA IPGRTLVPRL LQTDASINQG NSGGPMFNLN GEIVGIVSHI LSKSGGSNGL GFVVSVDTVR HIIDSDPGTF SGFIPLLLNK KQSYAINNTA GHGMLIQHVI PGTLADKLGF KGGNLSVVIG RSPILLGGDI LLEVGGRAII DLASAVQIKK HLATFEKGDR VTFKYLRNGQ KKETYWIVE
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