Gene CPS_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4142 
Symbol 
ID3522838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp4358112 
End bp4358780 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content39% 
IMG OID637286585 
ProductGntR family transcriptional regulator 
Protein accessionYP_270796 
Protein GI71282365 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.209682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATAG TATATAAAAC AAGAACACAG TTAGTGGTTG AAACACTTAG AGAAAAAATT 
CTTAGTGGTG AGTTGAAGGC TGGCGAATCA CTTCGTCAAG CGGCGTTAGC GACCGAATTA 
AATGTAAGTC GTATTCCGGT AAGAGAAGCC TTATTGCAGC TTGAAGGAGA AGGCTTAGTT 
GTCTTTGAAC CACATAAAGG CGCCACAGTA ACTGAACTTA ACGCTAAGCA TGTTGTTGAG 
CTTTTTGAAT TGCGAGCAAT GCTTGAAGGG CACTTATTAG CTGCATCGTT ACCACTATTA 
ACTAGTGAAA AGCTAGCTGA GGCAAGTGAG ATTTTAGGCC AATTAGATAA AGCCCTTGGT 
AAGGAAAATG CCGCAAATAC CTGGAGCGAG CTGAACTCTC GCTATCATAA TTGTTTATAC 
TCGGCAGCTA ATCGTCCACA AACACAAGAT TTAGTTAATA CCTTAAATAA AAATGCGGAT 
AGATATATTC GTATGCATTT ATTGTGGGCA GGTGGCATTT CAAAAGCAGG ACCTGAACAC 
AATCAGCTAT TAGCTTTTTG TAAAACCGGC GATGTTGACG AAGCTGTTGC GGTATTAAAG 
CATCATATTT TAAGCTCTAG AGATGAAATA AAAGCTTTTT TAGAGCAACG TGAAGCAGCT 
AACAATTAA
 
Protein sequence
MTIVYKTRTQ LVVETLREKI LSGELKAGES LRQAALATEL NVSRIPVREA LLQLEGEGLV 
VFEPHKGATV TELNAKHVVE LFELRAMLEG HLLAASLPLL TSEKLAEASE ILGQLDKALG 
KENAANTWSE LNSRYHNCLY SAANRPQTQD LVNTLNKNAD RYIRMHLLWA GGISKAGPEH 
NQLLAFCKTG DVDEAVAVLK HHILSSRDEI KAFLEQREAA NN