Gene CPS_4136 details

Gene Information

• Locus tag: CPS_4136
• ID: 3520611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4351798
• End bp: 4352418
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637286579
• Product: amino acid transporter LysE
• Protein accession: YP_270791
• Protein GI: 71280147
• COG category: [R] General function prediction only
• COG ID: [COG1279] Lysine efflux permease
• TIGRFAM ID: [TIGR00948] L-lysine exporter

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.540891
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTAT TAGTTTTAGC AAAAGGTTTT ACCCTAACAT TAAGTATGAT CATACCTATT 
GGTACGCAAA ACTCTATGTT AATCAATCAG GGCATTCATC AAAATCATCA TAAAATGACC 
GCCGCTCTTT TTGTTCTTTA CGATGCTTTA TTAATAAGTA TGGGCGTACT TGGCGGTAGC 
ATTTTACTGT CACATAACGC CACTTTATTC AATGTACTCA CTTGGGGTGG TATCTTGTTT 
TTAAGTGTTT ATGGCCTATT GTCGATGAAA TCTGCATTTG TGCGAAGTAA GAATACTGCT 
GATACTATTT TGAAAAAGAA ATCAGCAAAA ATTATTTTTC TGACAACCTT GGCCGTTACT 
TTTTTAAATC CACATGCTTA CATTGACACC GTAATGGTTA TTGGCAGTGT TGGCGGGCAA 
TACTCAGATG AGGTAAAAGT GTATTTCCTT ATTGGTTGTA TTTTTGGTTC GTTAACTTGG 
TTTAGCTGTT TAGCATTTGG CGCAGCCAAA CTTTCAAAAC AATTAAGCAA ACCAAAAGTA 
AAAATGACGA TAGATATAAT TATTGCTTTA GTAATGTGGT TAATTGCTTG GTCGCTGTTT 
ACTACATGGA TGGCCAGATA A 

 

Protein sequence

MSLLVLAKGF TLTLSMIIPI GTQNSMLINQ GIHQNHHKMT AALFVLYDAL LISMGVLGGS 
ILLSHNATLF NVLTWGGILF LSVYGLLSMK SAFVRSKNTA DTILKKKSAK IIFLTTLAVT 
FLNPHAYIDT VMVIGSVGGQ YSDEVKVYFL IGCIFGSLTW FSCLAFGAAK LSKQLSKPKV 
KMTIDIIIAL VMWLIAWSLF TTWMAR